Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
---|---|
Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is yjcK [H]
Identifier: 21226669
GI number: 21226669
Start: 693485
End: 693991
Strand: Direct
Name: yjcK [H]
Synonym: MM_0567
Alternate gene names: 21226669
Gene position: 693485-693991 (Clockwise)
Preceding gene: 21226667
Following gene: 21226671
Centisome position: 16.93
GC content: 42.6
Gene sequence:
>507_bases ATGCTTCAAGTAAAAATTCGCCCTCAGGAGATTTTTGACGCAGAACGCTTTTTTGAAATATTCACTCATCTGGACTACCA GTTTATAGAAGTCCCCATAAAAACCCTTGAGGACGAAAAAAGGTTCCTGAAGCTTAACGAAGCGAAACGGAAAACTAATT TTGAGCATAACTATTCAATCCTTTTGGAAGAAAAACTTGTGGGAGGCTGCGGGATCAGGATTGACCAGCACAGGCCGTGG ACAGGGGAAATCGGCTATTTTGTGGATAAGGCTTACCAGGGTATGGGCATTGCAACCGAAGCTGTAAGACAGCTTGAGAA AATCGGTTTTGACGAACTGAAACTGCAGAGAATAACTATCCTGATGGATGTAAGGAACACTGCAAGCGAGAAGATTGCAG TGAAATGCGGATACGAAAAAGAAGGCATAGCAAAAAAGATCCACAGGATAGGGCAGGAGTATTATGACTGCTTTGTGTAT GCAAAAACCAGGCAAATAACAGAGTAG
Upstream 100 bases:
>100_bases CAGGGGTTTAACAGGGCTCCCAGGGGTTTAACAGAGCCCCGGCTAAAAAATTGGAAAGGTGTCAAAAGCTTTATTCAGGA AGGAAGCTCAATTTTCCATC
Downstream 100 bases:
>100_bases AGAGGTCTGCCGCAGAAAAAGATATTAGAGTGGTAAAAGAGGAGCTATTGGAGGAATTTTTAAGGACTGTAAGAAGGACT TTTAAAGGGCTGTAAGAGAG
Product: acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MLQVKIRPQEIFDAERFFEIFTHLDYQFIEVPIKTLEDEKRFLKLNEAKRKTNFEHNYSILLEEKLVGGCGIRIDQHRPW TGEIGYFVDKAYQGMGIATEAVRQLEKIGFDELKLQRITILMDVRNTASEKIAVKCGYEKEGIAKKIHRIGQEYYDCFVY AKTRQITE
Sequences:
>Translated_168_residues MLQVKIRPQEIFDAERFFEIFTHLDYQFIEVPIKTLEDEKRFLKLNEAKRKTNFEHNYSILLEEKLVGGCGIRIDQHRPW TGEIGYFVDKAYQGMGIATEAVRQLEKIGFDELKLQRITILMDVRNTASEKIAVKCGYEKEGIAKKIHRIGQEYYDCFVY AKTRQITE >Mature_168_residues MLQVKIRPQEIFDAERFFEIFTHLDYQFIEVPIKTLEDEKRFLKLNEAKRKTNFEHNYSILLEEKLVGGCGIRIDQHRPW TGEIGYFVDKAYQGMGIATEAVRQLEKIGFDELKLQRITILMDVRNTASEKIAVKCGYEKEGIAKKIHRIGQEYYDCFVY AKTRQITE
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S5 [H]
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 19816; Mature: 19816
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQVKIRPQEIFDAERFFEIFTHLDYQFIEVPIKTLEDEKRFLKLNEAKRKTNFEHNYSI CEEEEECHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LLEEKLVGGCGIRIDQHRPWTGEIGYFVDKAYQGMGIATEAVRQLEKIGFDELKLQRITI EEECCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHEEEEE LMDVRNTASEKIAVKCGYEKEGIAKKIHRIGQEYYDCFVYAKTRQITE EEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEECCCCCC >Mature Secondary Structure MLQVKIRPQEIFDAERFFEIFTHLDYQFIEVPIKTLEDEKRFLKLNEAKRKTNFEHNYSI CEEEEECHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LLEEKLVGGCGIRIDQHRPWTGEIGYFVDKAYQGMGIATEAVRQLEKIGFDELKLQRITI EEECCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHEEEEE LMDVRNTASEKIAVKCGYEKEGIAKKIHRIGQEYYDCFVYAKTRQITE EEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]