Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226667

Identifier: 21226667

GI number: 21226667

Start: 691202

End: 691804

Strand: Direct

Name: 21226667

Synonym: MM_0565

Alternate gene names: NA

Gene position: 691202-691804 (Clockwise)

Preceding gene: 21226657

Following gene: 21226669

Centisome position: 16.87

GC content: 42.95

Gene sequence:

>603_bases
ATGTCAAAGCTTACACTCATCTCCACCATCTATTCCCTTGAACCTGTTATTATCTGTGTGACGCGCCTCTCTCCTTCAAA
AATTATACTTCTCTCAGAAGAAGGGGCAAATGATAAGAAAGTGCAATCTGAAGATATAATTGAAAAAACCTTCAAAAACG
CGCTTGAAGTTGAGAAAAAATATACTGCTCTTTATGACACCGTCCGCGTAGCAAAAGACGTTGCTGAACTGATTGAAAAG
GAACACGATAGAGGCAACCAGGTCATTGTAAATGTATCTGGAGGCAGAAAGCCGCAGGCTTTTGGGGCGCTTTTCGGGGC
ATATGCAAGAAATGATATGGTTCAGAGAGTTGTTTACGTCACCGAAGAAGACAGCATGATGATTGATTTTCCGGTCCTGA
GCTTCAACCTATCGGAAACCAAGAAACTGATACTCGAAGAGATCCAGAAAGGGAACTCATCTGTCACCAAAATTGCAGCG
ACCGCCGGGATTTCTAAAGGGATGACTTACAACCATCTCAGGGAACTCAAATCGATGGGATATATCGCAGACGGGGACAG
CGGATACATAATAACTGATGCAGGAAGAATTGCTTCCATTTAA

Upstream 100 bases:

>100_bases
TTTCTAAAAATAATTATAAAAATAAGCAAATAGAACCAAACATCAACTAAATCCCTATATCGTAAAACATTTAACCAAAC
CCTACAATACATGACATCTA

Downstream 100 bases:

>100_bases
CTGCCTGAAGAGTAGAGAAATTAACCGAAAAGCTTGAGGAGCTTAAGACAGAGCTATCGCCTTTACCTTCTTTCTTACCT
TCCTTCTTTCTTACCTTCCT

Product: transcriptional regulator

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MSKLTLISTIYSLEPVIICVTRLSPSKIILLSEEGANDKKVQSEDIIEKTFKNALEVEKKYTALYDTVRVAKDVAELIEK
EHDRGNQVIVNVSGGRKPQAFGALFGAYARNDMVQRVVYVTEEDSMMIDFPVLSFNLSETKKLILEEIQKGNSSVTKIAA
TAGISKGMTYNHLRELKSMGYIADGDSGYIITDAGRIASI

Sequences:

>Translated_200_residues
MSKLTLISTIYSLEPVIICVTRLSPSKIILLSEEGANDKKVQSEDIIEKTFKNALEVEKKYTALYDTVRVAKDVAELIEK
EHDRGNQVIVNVSGGRKPQAFGALFGAYARNDMVQRVVYVTEEDSMMIDFPVLSFNLSETKKLILEEIQKGNSSVTKIAA
TAGISKGMTYNHLRELKSMGYIADGDSGYIITDAGRIASI
>Mature_199_residues
SKLTLISTIYSLEPVIICVTRLSPSKIILLSEEGANDKKVQSEDIIEKTFKNALEVEKKYTALYDTVRVAKDVAELIEKE
HDRGNQVIVNVSGGRKPQAFGALFGAYARNDMVQRVVYVTEEDSMMIDFPVLSFNLSETKKLILEEIQKGNSSVTKIAAT
AGISKGMTYNHLRELKSMGYIADGDSGYIITDAGRIASI

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22088; Mature: 21956

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLTLISTIYSLEPVIICVTRLSPSKIILLSEEGANDKKVQSEDIIEKTFKNALEVEKK
CCCHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
YTALYDTVRVAKDVAELIEKEHDRGNQVIVNVSGGRKPQAFGALFGAYARNDMVQRVVYV
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEE
TEEDSMMIDFPVLSFNLSETKKLILEEIQKGNSSVTKIAATAGISKGMTYNHLRELKSMG
ECCCCEEEEEEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCC
YIADGDSGYIITDAGRIASI
CEEECCCCEEEECCCCCCCC
>Mature Secondary Structure 
SKLTLISTIYSLEPVIICVTRLSPSKIILLSEEGANDKKVQSEDIIEKTFKNALEVEKK
CCHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
YTALYDTVRVAKDVAELIEKEHDRGNQVIVNVSGGRKPQAFGALFGAYARNDMVQRVVYV
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEE
TEEDSMMIDFPVLSFNLSETKKLILEEIQKGNSSVTKIAATAGISKGMTYNHLRELKSMG
ECCCCEEEEEEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCC
YIADGDSGYIITDAGRIASI
CEEECCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA