Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226657
Identifier: 21226657
GI number: 21226657
Start: 680804
End: 681043
Strand: Direct
Name: 21226657
Synonym: MM_0555
Alternate gene names: NA
Gene position: 680804-681043 (Clockwise)
Preceding gene: 21226655
Following gene: 21226667
Centisome position: 16.62
GC content: 37.5
Gene sequence:
>240_bases TTGGTTTCAATCCTTGTTTTAATGGATCTTGCTCGCGAATTTTCTCAGATCCTTGCAGGGAAAGATAAGGCTATAAGTTT CAATCCTTGTTTTAATGGATCTTGCTCGCGAATTTGTATGTGTACACATGGTGTACACATAAGGCGAAGTTTCAATCCTT GTTTTAATGGATCTTGCTCGCGAATAGGAAAATGTTATATCAACGAAAGAACGCGGAGGAAGTTTCAATCCTTGTTTTAA
Upstream 100 bases:
>100_bases ATCTTCTATTGACACGTTGAATGTACTTGAGTTTCAATCCTTGTTTTAATGGATCTTGCTCGCGAATAGGTCACAGAGAG AATCAAAAATACAGTTAGAA
Downstream 100 bases:
>100_bases TGGATCTTGCTCGCGAATAGTGACCTGATAGACGTAAGGAGCAATCTTCGCGGCGTTTCAATCCTTGTTTTAATGGATCT TGCTCGCGAATGCGACGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MVSILVLMDLAREFSQILAGKDKAISFNPCFNGSCSRICMCTHGVHIRRSFNPCFNGSCSRIGKCYINERTRRKFQSLF
Sequences:
>Translated_79_residues MVSILVLMDLAREFSQILAGKDKAISFNPCFNGSCSRICMCTHGVHIRRSFNPCFNGSCSRIGKCYINERTRRKFQSLF >Mature_79_residues MVSILVLMDLAREFSQILAGKDKAISFNPCFNGSCSRICMCTHGVHIRRSFNPCFNGSCSRIGKCYINERTRRKFQSLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9013; Mature: 9013
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 12.7 %Cys+Met (Translated Protein) 8.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 12.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSILVLMDLAREFSQILAGKDKAISFNPCFNGSCSRICMCTHGVHIRRSFNPCFNGSCS CHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCEEEEECCCCCCCCCCH RIGKCYINERTRRKFQSLF HHHHHHCCHHHHHHHHHCC >Mature Secondary Structure MVSILVLMDLAREFSQILAGKDKAISFNPCFNGSCSRICMCTHGVHIRRSFNPCFNGSCS CHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCEEEEECCCCCCCCCCH RIGKCYINERTRRKFQSLF HHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA