Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226655
Identifier: 21226655
GI number: 21226655
Start: 679897
End: 680190
Strand: Direct
Name: 21226655
Synonym: MM_0553
Alternate gene names: NA
Gene position: 679897-680190 (Clockwise)
Preceding gene: 21226650
Following gene: 21226657
Centisome position: 16.6
GC content: 41.16
Gene sequence:
>294_bases TTGAAAGCTTTCAGGCTTAGTGAGGCAGGTTTCAATCCTTGTTTTAATGGATCTTGCTCGCGAATTTGCCGATTACATGA AGGAGCACAGCAGGGACGATTTGTTTCAATCCTTGTTTTAATGGATCTTGCTCGCGAATTAATAGGATCATTGATGCAGA AATCTCCTGAGAGTAGTTTCAATCCTTGTTTTAATGGATCTTGCTCGCGAATCTGTTCCCGCGCTGGCAAGAGTCACCGA GGAAAATATCAAAAAGTTTCAATCCTTGTTTTAATGGATCTTGCTCGCGAATAA
Upstream 100 bases:
>100_bases GGATCTTGCTCGCGAATCAGTGGGCGCGGAAAGAGTAATTCCCGCCACTTATAGTTTCAATCCTTGTTTTAATGGATCTT GCTCGCGAATAGCTAAAGCA
Downstream 100 bases:
>100_bases ATAATGCCCGCCTTCGTGAAACCAGAGCACGATGGTTTCAATCCTTGTTTTAATGGATCTTGCTCGCGAATCCCAATTTC TCAGTTTGAGAGAGAGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MKAFRLSEAGFNPCFNGSCSRICRLHEGAQQGRFVSILVLMDLARELIGSLMQKSPESSFNPCFNGSCSRICSRAGKSHR GKYQKVSILVLMDLARE
Sequences:
>Translated_97_residues MKAFRLSEAGFNPCFNGSCSRICRLHEGAQQGRFVSILVLMDLARELIGSLMQKSPESSFNPCFNGSCSRICSRAGKSHR GKYQKVSILVLMDLARE >Mature_97_residues MKAFRLSEAGFNPCFNGSCSRICRLHEGAQQGRFVSILVLMDLARELIGSLMQKSPESSFNPCFNGSCSRICSRAGKSHR GKYQKVSILVLMDLARE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10774; Mature: 10774
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 10.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFRLSEAGFNPCFNGSCSRICRLHEGAQQGRFVSILVLMDLARELIGSLMQKSPESSF CCCCCCCCCCCCCCCCCHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC NPCFNGSCSRICSRAGKSHRGKYQKVSILVLMDLARE CCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKAFRLSEAGFNPCFNGSCSRICRLHEGAQQGRFVSILVLMDLARELIGSLMQKSPESSF CCCCCCCCCCCCCCCCCHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC NPCFNGSCSRICSRAGKSHRGKYQKVSILVLMDLARE CCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA