Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226655

Identifier: 21226655

GI number: 21226655

Start: 679897

End: 680190

Strand: Direct

Name: 21226655

Synonym: MM_0553

Alternate gene names: NA

Gene position: 679897-680190 (Clockwise)

Preceding gene: 21226650

Following gene: 21226657

Centisome position: 16.6

GC content: 41.16

Gene sequence:

>294_bases
TTGAAAGCTTTCAGGCTTAGTGAGGCAGGTTTCAATCCTTGTTTTAATGGATCTTGCTCGCGAATTTGCCGATTACATGA
AGGAGCACAGCAGGGACGATTTGTTTCAATCCTTGTTTTAATGGATCTTGCTCGCGAATTAATAGGATCATTGATGCAGA
AATCTCCTGAGAGTAGTTTCAATCCTTGTTTTAATGGATCTTGCTCGCGAATCTGTTCCCGCGCTGGCAAGAGTCACCGA
GGAAAATATCAAAAAGTTTCAATCCTTGTTTTAATGGATCTTGCTCGCGAATAA

Upstream 100 bases:

>100_bases
GGATCTTGCTCGCGAATCAGTGGGCGCGGAAAGAGTAATTCCCGCCACTTATAGTTTCAATCCTTGTTTTAATGGATCTT
GCTCGCGAATAGCTAAAGCA

Downstream 100 bases:

>100_bases
ATAATGCCCGCCTTCGTGAAACCAGAGCACGATGGTTTCAATCCTTGTTTTAATGGATCTTGCTCGCGAATCCCAATTTC
TCAGTTTGAGAGAGAGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MKAFRLSEAGFNPCFNGSCSRICRLHEGAQQGRFVSILVLMDLARELIGSLMQKSPESSFNPCFNGSCSRICSRAGKSHR
GKYQKVSILVLMDLARE

Sequences:

>Translated_97_residues
MKAFRLSEAGFNPCFNGSCSRICRLHEGAQQGRFVSILVLMDLARELIGSLMQKSPESSFNPCFNGSCSRICSRAGKSHR
GKYQKVSILVLMDLARE
>Mature_97_residues
MKAFRLSEAGFNPCFNGSCSRICRLHEGAQQGRFVSILVLMDLARELIGSLMQKSPESSFNPCFNGSCSRICSRAGKSHR
GKYQKVSILVLMDLARE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10774; Mature: 10774

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
10.3 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
10.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFRLSEAGFNPCFNGSCSRICRLHEGAQQGRFVSILVLMDLARELIGSLMQKSPESSF
CCCCCCCCCCCCCCCCCHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
NPCFNGSCSRICSRAGKSHRGKYQKVSILVLMDLARE
CCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKAFRLSEAGFNPCFNGSCSRICRLHEGAQQGRFVSILVLMDLARELIGSLMQKSPESSF
CCCCCCCCCCCCCCCCCHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
NPCFNGSCSRICSRAGKSHRGKYQKVSILVLMDLARE
CCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA