Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
---|---|
Accession | NC_003901 |
Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21226654
Identifier: 21226654
GI number: 21226654
Start: 678610
End: 678858
Strand: Reverse
Name: 21226654
Synonym: MM_0552
Alternate gene names: NA
Gene position: 678858-678610 (Counterclockwise)
Preceding gene: 21226656
Following gene: 21226653
Centisome position: 16.57
GC content: 35.34
Gene sequence:
>249_bases ATGACAGAAATGACTCTAATAGAAGCACTGAAAAAACTTGCATTAATCACGAAAAAAGGACTGGATGAACTGATTCATAT CCCGGATAATGCAAGTGGACCTATTACAATTGGTGAGGCAATTAAAGAAATACAAGATCACGATTCTGACATTTCTGAAA CTGATGATTATATAATAGGTAGTGACGGTATCTGGAAAACAGGGGAAGATGGAAGCGAAATTGTATATCAGATTAAAGAA AGTGAGTGA
Upstream 100 bases:
>100_bases ATCCTGAAAGGAAGTGTGAAGATACAAGACATACAGGAAGAGACCTAAACTGTATTATAGCAGAATAAGAAAAGAACTTC TGGAAGGAGGAATAAAAACC
Downstream 100 bases:
>100_bases CAGCCTTTACTCTTCATTCAAAAAAGATATAGCTTCGGTGTCGCTATGCATAAAACTTTCAGGAACTTTAACGGTAAAAC CTACATGCTCGACGAACTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MTEMTLIEALKKLALITKKGLDELIHIPDNASGPITIGEAIKEIQDHDSDISETDDYIIGSDGIWKTGEDGSEIVYQIKE SE
Sequences:
>Translated_82_residues MTEMTLIEALKKLALITKKGLDELIHIPDNASGPITIGEAIKEIQDHDSDISETDDYIIGSDGIWKTGEDGSEIVYQIKE SE >Mature_81_residues TEMTLIEALKKLALITKKGLDELIHIPDNASGPITIGEAIKEIQDHDSDISETDDYIIGSDGIWKTGEDGSEIVYQIKES E
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9031; Mature: 8900
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEMTLIEALKKLALITKKGLDELIHIPDNASGPITIGEAIKEIQDHDSDISETDDYIIG CCCHHHHHHHHHHHHHHHHCHHHEEECCCCCCCCEEHHHHHHHHHHCCCCCCCCCCEEEC SDGIWKTGEDGSEIVYQIKESE CCCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure TEMTLIEALKKLALITKKGLDELIHIPDNASGPITIGEAIKEIQDHDSDISETDDYIIG CCHHHHHHHHHHHHHHHHCHHHEEECCCCCCCCEEHHHHHHHHHHCCCCCCCCCCEEEC SDGIWKTGEDGSEIVYQIKESE CCCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA