Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
---|---|
Accession | NC_003901 |
Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21226653
Identifier: 21226653
GI number: 21226653
Start: 678340
End: 678564
Strand: Reverse
Name: 21226653
Synonym: MM_0551
Alternate gene names: NA
Gene position: 678564-678340 (Counterclockwise)
Preceding gene: 21226654
Following gene: 21226652
Centisome position: 16.57
GC content: 37.78
Gene sequence:
>225_bases ATGCATAAAACTTTCAGGAACTTTAACGGTAAAACCTACATGCTCGACGAACTCAGTTATTTTGGGCTTGATAAATCCGA TGCCGAGAAAAGAAAAGCCATGATAAAGAAGAGTGGGCTTGGGGTTAGATGCATAAAGAAAGCAAATGGCAAGTACGTAA TATACCGTGAGTATATTGGGGATATAAATAAAGAAGATGGCTCTTCATTTTTTAGAGTGGGTTGA
Upstream 100 bases:
>100_bases GAAAACAGGGGAAGATGGAAGCGAAATTGTATATCAGATTAAAGAAAGTGAGTGACAGCCTTTACTCTTCATTCAAAAAA GATATAGCTTCGGTGTCGCT
Downstream 100 bases:
>100_bases GAGTCTACCCAAAAAATGTTTGATCCATTGTATCATTAAATGTTTGATCCATTGTATCATTAAATGTTTGATCCATTGTA TCATTAAATGTTTGATCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MHKTFRNFNGKTYMLDELSYFGLDKSDAEKRKAMIKKSGLGVRCIKKANGKYVIYREYIGDINKEDGSSFFRVG
Sequences:
>Translated_74_residues MHKTFRNFNGKTYMLDELSYFGLDKSDAEKRKAMIKKSGLGVRCIKKANGKYVIYREYIGDINKEDGSSFFRVG >Mature_74_residues MHKTFRNFNGKTYMLDELSYFGLDKSDAEKRKAMIKKSGLGVRCIKKANGKYVIYREYIGDINKEDGSSFFRVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8566; Mature: 8566
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKTFRNFNGKTYMLDELSYFGLDKSDAEKRKAMIKKSGLGVRCIKKANGKYVIYREYIG CCCCCCCCCCCEEEECCCHHCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEHHCC DINKEDGSSFFRVG CCCCCCCCEEEECC >Mature Secondary Structure MHKTFRNFNGKTYMLDELSYFGLDKSDAEKRKAMIKKSGLGVRCIKKANGKYVIYREYIG CCCCCCCCCCCEEEECCCHHCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEHHCC DINKEDGSSFFRVG CCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA