Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226656
Identifier: 21226656
GI number: 21226656
Start: 680167
End: 680421
Strand: Reverse
Name: 21226656
Synonym: MM_0554
Alternate gene names: NA
Gene position: 680421-680167 (Counterclockwise)
Preceding gene: 21226659
Following gene: 21226654
Centisome position: 16.61
GC content: 38.82
Gene sequence:
>255_bases TTGATTTCAGATCTTTATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAACTCCACCTCTTCCTGATTATCAGCAAAA AGGCTTTATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAACAAAAAATAACTCTCTCTCTCAAACTGAGAAATTGGG ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAACCATCGTGCTCTGGTTTCACGAAGGCGGGCATTATTTATTCGCG AGCAAGATCCATTAA
Upstream 100 bases:
>100_bases TTGAAACTGGAAATACAAAAGCCATAGGCTATAGAGATGTTAATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAACT GCTTTTCTCATTGATTTTAT
Downstream 100 bases:
>100_bases AACAAGGATTGAAACTTTTTGATATTTTCCTCGGTGACTCTTGCCAGCGCGGGAACAGATTCGCGAGCAAGATCCATTAA AACAAGGATTGAAACTACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MISDLYSRARSIKTRIETPPLPDYQQKGFIREQDPLKQGLKQKITLSLKLRNWDSRARSIKTRIETIVLWFHEGGHYLFA SKIH
Sequences:
>Translated_84_residues MISDLYSRARSIKTRIETPPLPDYQQKGFIREQDPLKQGLKQKITLSLKLRNWDSRARSIKTRIETIVLWFHEGGHYLFA SKIH >Mature_84_residues MISDLYSRARSIKTRIETPPLPDYQQKGFIREQDPLKQGLKQKITLSLKLRNWDSRARSIKTRIETIVLWFHEGGHYLFA SKIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9952; Mature: 9952
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISDLYSRARSIKTRIETPPLPDYQQKGFIREQDPLKQGLKQKITLSLKLRNWDSRARSI CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEEEECCCCHHHHHH KTRIETIVLWFHEGGHYLFASKIH HHHHHEEEEEEECCCCEEEEECCC >Mature Secondary Structure MISDLYSRARSIKTRIETPPLPDYQQKGFIREQDPLKQGLKQKITLSLKLRNWDSRARSI CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEEEECCCCHHHHHH KTRIETIVLWFHEGGHYLFASKIH HHHHHEEEEEEECCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA