Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226652

Identifier: 21226652

GI number: 21226652

Start: 677312

End: 677563

Strand: Reverse

Name: 21226652

Synonym: MM_0550

Alternate gene names: NA

Gene position: 677563-677312 (Counterclockwise)

Preceding gene: 21226653

Following gene: 21226651

Centisome position: 16.54

GC content: 32.94

Gene sequence:

>252_bases
ATGTCTACTATAGCTATAGATCCGGATGTAAAGGAATCACTTAAAGAGTTAAAGTTAGCTCCCGAAGAGTCTTATAATTC
AGTAGTTAAGAGACTTATTGGGGAAGTTAAAAAGAAAGAAGATTACAGTCCTATGTTTCCAAAAGAAGAAAAACAAGGAC
ATAAGGAATCTCATATAAATGATTTTGATGCCTGGTTAGAAAAGAAGCTGGTAGAAGATAAAAACATTTTAGATGCACTT
GGAAGAAAGTGA

Upstream 100 bases:

>100_bases
TTTTAATTGAAAATCGATAGCAAGAACAATTGTGAATATTCTAAACTTTACTGCGGAATGTGGGTATATTTATTTATTCT
ATTATAACATATTATAATAC

Downstream 100 bases:

>100_bases
TGTTTTGATCAGCTTAATTGAGATTTTGAAAATTCATCAAAAGGTTATAGATTACGATAAATTTAAAGATCCGGAGGATT
ATACACCCGCAATACGTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MSTIAIDPDVKESLKELKLAPEESYNSVVKRLIGEVKKKEDYSPMFPKEEKQGHKESHINDFDAWLEKKLVEDKNILDAL
GRK

Sequences:

>Translated_83_residues
MSTIAIDPDVKESLKELKLAPEESYNSVVKRLIGEVKKKEDYSPMFPKEEKQGHKESHINDFDAWLEKKLVEDKNILDAL
GRK
>Mature_82_residues
STIAIDPDVKESLKELKLAPEESYNSVVKRLIGEVKKKEDYSPMFPKEEKQGHKESHINDFDAWLEKKLVEDKNILDALG
RK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9599; Mature: 9468

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIAIDPDVKESLKELKLAPEESYNSVVKRLIGEVKKKEDYSPMFPKEEKQGHKESHIN
CCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHCCC
DFDAWLEKKLVEDKNILDALGRK
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STIAIDPDVKESLKELKLAPEESYNSVVKRLIGEVKKKEDYSPMFPKEEKQGHKESHIN
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHCCC
DFDAWLEKKLVEDKNILDALGRK
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA