Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226651
Identifier: 21226651
GI number: 21226651
Start: 676921
End: 677325
Strand: Reverse
Name: 21226651
Synonym: MM_0549
Alternate gene names: NA
Gene position: 677325-676921 (Counterclockwise)
Preceding gene: 21226652
Following gene: 21226645
Centisome position: 16.53
GC content: 29.88
Gene sequence:
>405_bases TTGGAAGAAAGTGATGTTTTGATCAGCTTAATTGAGATTTTGAAAATTCATCAAAAGGTTATAGATTACGATAAATTTAA AGATCCGGAGGATTATACACCCGCAATACGTTCTTTAGCTACGTTAGAATTAATGTTTGAATATTTAATAAAAGAATCCA ATACTATTTTCGAAAATGCCGCTGTAATAGTCTACACTATTGTTGCAAAACATCCATTTTTCAATGGAAATAAAAGAACT GGTTATGAAGCCATGAATTTTATTATTGAAGATGGAGGATACGGGTTTACTTCTACAGATGAAGAGATGATAGAATTCAT AATTAGAGTGGCTACAACAGAAAATGAGATGTCAATTGAAGAAATAAAAGAATGGATAATTCGACATACGGAAAAAATAC TATAA
Upstream 100 bases:
>100_bases CCAAAAGAAGAAAAACAAGGACATAAGGAATCTCATATAAATGATTTTGATGCCTGGTTAGAAAAGAAGCTGGTAGAAGA TAAAAACATTTTAGATGCAC
Downstream 100 bases:
>100_bases CCTCGAATCAAAGAGATTTACAGAGTACAAGTAATAATTCGCTAGCAAGATCCACTAAAATAAGGATTGAAACGTGACCT GAATCTGATAGTTGCTCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MEESDVLISLIEILKIHQKVIDYDKFKDPEDYTPAIRSLATLELMFEYLIKESNTIFENAAVIVYTIVAKHPFFNGNKRT GYEAMNFIIEDGGYGFTSTDEEMIEFIIRVATTENEMSIEEIKEWIIRHTEKIL
Sequences:
>Translated_134_residues MEESDVLISLIEILKIHQKVIDYDKFKDPEDYTPAIRSLATLELMFEYLIKESNTIFENAAVIVYTIVAKHPFFNGNKRT GYEAMNFIIEDGGYGFTSTDEEMIEFIIRVATTENEMSIEEIKEWIIRHTEKIL >Mature_134_residues MEESDVLISLIEILKIHQKVIDYDKFKDPEDYTPAIRSLATLELMFEYLIKESNTIFENAAVIVYTIVAKHPFFNGNKRT GYEAMNFIIEDGGYGFTSTDEEMIEFIIRVATTENEMSIEEIKEWIIRHTEKIL
Specific function: Unknown
COG id: COG3654
COG function: function code R; Prophage maintenance system killer protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15649; Mature: 15649
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEESDVLISLIEILKIHQKVIDYDKFKDPEDYTPAIRSLATLELMFEYLIKESNTIFENA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCH AVIVYTIVAKHPFFNGNKRTGYEAMNFIIEDGGYGFTSTDEEMIEFIIRVATTENEMSIE HHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHH EIKEWIIRHTEKIL HHHHHHHHHHHHCC >Mature Secondary Structure MEESDVLISLIEILKIHQKVIDYDKFKDPEDYTPAIRSLATLELMFEYLIKESNTIFENA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCH AVIVYTIVAKHPFFNGNKRTGYEAMNFIIEDGGYGFTSTDEEMIEFIIRVATTENEMSIE HHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHH EIKEWIIRHTEKIL HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA