Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226628
Identifier: 21226628
GI number: 21226628
Start: 653926
End: 654420
Strand: Reverse
Name: 21226628
Synonym: MM_0526
Alternate gene names: NA
Gene position: 654420-653926 (Counterclockwise)
Preceding gene: 21226629
Following gene: 21226627
Centisome position: 15.98
GC content: 44.44
Gene sequence:
>495_bases TTGATTAAGAGGGGGATTTTTGTGATTGCTGATTTTAGGGAGATTATAAAGGGAGACAGGGTGAGGGCTAATACGCCTCC TGAAATTAATGAAGCAATTGACCGTGAAATCGCTGCAAGCGTACGGTTCTATGCGGGCAAGACCGACTATGAGATTTCCA GGAGGATAGAAGAGCTTTGCAGTGAATGGGATATAGGGCGCCATGTTGAAACTCGTGCGGCTGTGATTTCCATTGTCGGG CTGGTGCTTGGTTTTAAAAGGGGCAGAAAATGGTTTGTCCTGCCTTTAATAGCCACAACTTTCCTGCTTCTTTATGCTGT ACTGGGATGGGCTCCTCCTGTACCTTTTCTCAGAAAAGCCGGTATTCGTACCAGGCAGGAAATTGATGTCGAAAAATATG CCTTGAGGGTTTTGCGCGGCGATTTCGATGATCTTTTTTACCAGGAAAACAGGACAGAAAACGCAGAGAATTTTTCTGAA ATTGATGATGTTTAA
Upstream 100 bases:
>100_bases AATTTTTATGATTAACTTTATATGATCATATCTCCACCCTATTTTAGTGAAGGGTATTCCGGTTCAGGGCATCAGGGGAA AGTAAAGCCTGAAGATCTGT
Downstream 100 bases:
>100_bases GGGGCAGAAACTTTAAAGATAAATTTTTGATTTTTATTAATTTTTAAATTTATCTGGAACGTATTTTTTGCCAGGGGGAA TATGCCGGTGGTTGAATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MIKRGIFVIADFREIIKGDRVRANTPPEINEAIDREIAASVRFYAGKTDYEISRRIEELCSEWDIGRHVETRAAVISIVG LVLGFKRGRKWFVLPLIATTFLLLYAVLGWAPPVPFLRKAGIRTRQEIDVEKYALRVLRGDFDDLFYQENRTENAENFSE IDDV
Sequences:
>Translated_164_residues MIKRGIFVIADFREIIKGDRVRANTPPEINEAIDREIAASVRFYAGKTDYEISRRIEELCSEWDIGRHVETRAAVISIVG LVLGFKRGRKWFVLPLIATTFLLLYAVLGWAPPVPFLRKAGIRTRQEIDVEKYALRVLRGDFDDLFYQENRTENAENFSE IDDV >Mature_164_residues MIKRGIFVIADFREIIKGDRVRANTPPEINEAIDREIAASVRFYAGKTDYEISRRIEELCSEWDIGRHVETRAAVISIVG LVLGFKRGRKWFVLPLIATTFLLLYAVLGWAPPVPFLRKAGIRTRQEIDVEKYALRVLRGDFDDLFYQENRTENAENFSE IDDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18949; Mature: 18949
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKRGIFVIADFREIIKGDRVRANTPPEINEAIDREIAASVRFYAGKTDYEISRRIEELC CCCCCEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH SEWDIGRHVETRAAVISIVGLVLGFKRGRKWFVLPLIATTFLLLYAVLGWAPPVPFLRKA HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHC GIRTRQEIDVEKYALRVLRGDFDDLFYQENRTENAENFSEIDDV CCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHCCC >Mature Secondary Structure MIKRGIFVIADFREIIKGDRVRANTPPEINEAIDREIAASVRFYAGKTDYEISRRIEELC CCCCCEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH SEWDIGRHVETRAAVISIVGLVLGFKRGRKWFVLPLIATTFLLLYAVLGWAPPVPFLRKA HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHC GIRTRQEIDVEKYALRVLRGDFDDLFYQENRTENAENFSEIDDV CCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA