The gene/protein map for NC_006360 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21226617

Identifier: 21226617

GI number: 21226617

Start: 640248

End: 641360

Strand: Reverse

Name: 21226617

Synonym: MM_0515

Alternate gene names: NA

Gene position: 641360-640248 (Counterclockwise)

Preceding gene: 21226618

Following gene: 21226616

Centisome position: 15.66

GC content: 48.07

Gene sequence:

>1113_bases
ATGACTCAAAAAGAGATTTCAATTATCCATCCCCGCCCGAGTTCAATCGTTGCGGCTCTTTATACTCTCAGGGACTTAAA
CGTAGATGTTGCAATCCTGCACGGGCCTCCAGGCTGTTCTTTCAAACATGCAAGGCTGCTTGAAGAAGACGGGATCCATG
TGGTAACCACAGGGCTTGACGAAAACGGTTTTGTGTTCGGTGGGCACGATAAGCTTGTGCAGGTCATCAATAAATCCATA
GAGTTATTCAACCCGAAAATCCTGGGCGTTGTCGGGACCTGCGCCAGCATGATCATAGGAGAGGAAATGCACGAAGCCGT
GCTTGAAGCAAACCCGGACATCCCTGTAATTGAAGTCGAAGTTCACGCAGGCTATCACAACAACACAAAAGGCGTGATTT
TTGCTCTGGAATCCGCACTCGATGCCGGGATAATTGACCATAAAGAGTTCGAGCGCCAGGAATACCTCCTCCAGAAAGCC
ACAGAGGTTGAAAAGAAATTCGGGGCTGCAAGCAAAGAGTACCTTGCTCCCTCCAGGGGCGACGTCAAATATAAAGTTGC
AAAGAGGCTTGTTGAACTCCTGAAGGAAGGCAAAAAAGGCCTGGTCATAATGAACGCCAAAAAAGAAACCGGCTACATGT
TTGCAGATATTACCCTTGCAGTCAATGAGGTTGCAGAGGCTCTCGGGAAAAAGGAAAACCTGGTAAACATGGCAAACATT
GACCCTGAGCTCGGGCTTCCCCGTGTCAGGCAGCATGCAGAATATATTATGCGGGACTTCAAAGCCCACGGGGTCGAGAT
TCACGAGATAATCGGTGGCATGGACGAATACCCTGTTGCAGGGGAAAAGGTCAGCGAGCTGATAAAAGAAAAATACAGTG
ATTATGATTTTGCCGTTATCACAGGTGTCCCACATGCAGTCCCCATGGAAAACATAGGGCATATGGAATTGATCTCGATC
ACAAATGGTCCAAGGCAGGTTCTCCCATTAAAAGAAATGGGACATGAGCATGTTATGGTTGAGATTGACCTCCACCCAAA
GACCCTTGGAGTAAGCCAGATCGTGGAGTCCGAATTCGGAGCCACATTAAGGGAAGTTGCAAAGGAAGCCTGA

Upstream 100 bases:

>100_bases
CACCTTTCCCGTTAATGCAGGGGTAATTGTCCTGCGGGACTCCGAAATTTTCCGGATGGAACCCATACCGGTATTCGTAT
AATCAGAAAGAGGATTTGTC

Downstream 100 bases:

>100_bases
AATGGGAAAGAAAGACCGGATAAAAAACCAGAGTCTATGATAAATCAGGATAAAGCCGGAAAATATTCAATAGCGGGAGG
AAGATCCTTTGAAAAAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MTQKEISIIHPRPSSIVAALYTLRDLNVDVAILHGPPGCSFKHARLLEEDGIHVVTTGLDENGFVFGGHDKLVQVINKSI
ELFNPKILGVVGTCASMIIGEEMHEAVLEANPDIPVIEVEVHAGYHNNTKGVIFALESALDAGIIDHKEFERQEYLLQKA
TEVEKKFGAASKEYLAPSRGDVKYKVAKRLVELLKEGKKGLVIMNAKKETGYMFADITLAVNEVAEALGKKENLVNMANI
DPELGLPRVRQHAEYIMRDFKAHGVEIHEIIGGMDEYPVAGEKVSELIKEKYSDYDFAVITGVPHAVPMENIGHMELISI
TNGPRQVLPLKEMGHEHVMVEIDLHPKTLGVSQIVESEFGATLREVAKEA

Sequences:

>Translated_370_residues
MTQKEISIIHPRPSSIVAALYTLRDLNVDVAILHGPPGCSFKHARLLEEDGIHVVTTGLDENGFVFGGHDKLVQVINKSI
ELFNPKILGVVGTCASMIIGEEMHEAVLEANPDIPVIEVEVHAGYHNNTKGVIFALESALDAGIIDHKEFERQEYLLQKA
TEVEKKFGAASKEYLAPSRGDVKYKVAKRLVELLKEGKKGLVIMNAKKETGYMFADITLAVNEVAEALGKKENLVNMANI
DPELGLPRVRQHAEYIMRDFKAHGVEIHEIIGGMDEYPVAGEKVSELIKEKYSDYDFAVITGVPHAVPMENIGHMELISI
TNGPRQVLPLKEMGHEHVMVEIDLHPKTLGVSQIVESEFGATLREVAKEA
>Mature_369_residues
TQKEISIIHPRPSSIVAALYTLRDLNVDVAILHGPPGCSFKHARLLEEDGIHVVTTGLDENGFVFGGHDKLVQVINKSIE
LFNPKILGVVGTCASMIIGEEMHEAVLEANPDIPVIEVEVHAGYHNNTKGVIFALESALDAGIIDHKEFERQEYLLQKAT
EVEKKFGAASKEYLAPSRGDVKYKVAKRLVELLKEGKKGLVIMNAKKETGYMFADITLAVNEVAEALGKKENLVNMANID
PELGLPRVRQHAEYIMRDFKAHGVEIHEIIGGMDEYPVAGEKVSELIKEKYSDYDFAVITGVPHAVPMENIGHMELISIT
NGPRQVLPLKEMGHEHVMVEIDLHPKTLGVSQIVESEFGATLREVAKEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1423 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017675
- InterPro:   IPR000510 [H]

Pfam domain/function: PF00148 Oxidored_nitro [H]

EC number: NA

Molecular weight: Translated: 40834; Mature: 40702

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQKEISIIHPRPSSIVAALYTLRDLNVDVAILHGPPGCSFKHARLLEEDGIHVVTTGLD
CCCCCEEEECCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHCCCCEEEEECCC
ENGFVFGGHDKLVQVINKSIELFNPKILGVVGTCASMIIGEEMHEAVLEANPDIPVIEVE
CCCCEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
VHAGYHNNTKGVIFALESALDAGIIDHKEFERQEYLLQKATEVEKKFGAASKEYLAPSRG
EECCCCCCCCEEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC
DVKYKVAKRLVELLKEGKKGLVIMNAKKETGYMFADITLAVNEVAEALGKKENLVNMANI
CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHCCHHCCEEHHCC
DPELGLPRVRQHAEYIMRDFKAHGVEIHEIIGGMDEYPVAGEKVSELIKEKYSDYDFAVI
CCCCCCHHHHHHHHHHHHHHHHCCEEHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEE
TGVPHAVPMENIGHMELISITNGPRQVLPLKEMGHEHVMVEIDLHPKTLGVSQIVESEFG
ECCCCCCCCCCCCCEEEEEECCCCHHCCCHHHCCCCEEEEEEECCCCCCCHHHHHHHHHH
ATLREVAKEA
HHHHHHHHCC
>Mature Secondary Structure 
TQKEISIIHPRPSSIVAALYTLRDLNVDVAILHGPPGCSFKHARLLEEDGIHVVTTGLD
CCCCEEEECCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHCCCCEEEEECCC
ENGFVFGGHDKLVQVINKSIELFNPKILGVVGTCASMIIGEEMHEAVLEANPDIPVIEVE
CCCCEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
VHAGYHNNTKGVIFALESALDAGIIDHKEFERQEYLLQKATEVEKKFGAASKEYLAPSRG
EECCCCCCCCEEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC
DVKYKVAKRLVELLKEGKKGLVIMNAKKETGYMFADITLAVNEVAEALGKKENLVNMANI
CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHCCHHCCEEHHCC
DPELGLPRVRQHAEYIMRDFKAHGVEIHEIIGGMDEYPVAGEKVSELIKEKYSDYDFAVI
CCCCCCHHHHHHHHHHHHHHHHCCEEHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEE
TGVPHAVPMENIGHMELISITNGPRQVLPLKEMGHEHVMVEIDLHPKTLGVSQIVESEFG
ECCCCCCCCCCCCCEEEEEECCCCHHCCCHHHCCCCEEEEEEECCCCCCCHHHHHHHHHH
ATLREVAKEA
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]