| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226589
Identifier: 21226589
GI number: 21226589
Start: 610856
End: 611152
Strand: Direct
Name: 21226589
Synonym: MM_0487
Alternate gene names: NA
Gene position: 610856-611152 (Clockwise)
Preceding gene: 21226588
Following gene: 21226590
Centisome position: 14.91
GC content: 38.72
Gene sequence:
>297_bases ATGTCAATGGTGAAAATGTCACCTGATGTGCTTTCATGTTCTGATGATGAGGGAAATCTGCTTATAGAGGTAGATATGGT CGGGGTAAAGAAAGAGAATATTGAATTGAAAATGGTTGAAGAAGGCTTTTTCATAAGGGCAAAAAAGGAAGAAACCGGAG TTGAATACGCTGGAACATACGCATTTTGCTGTAATGTAGTCCCGGAAAAAGCTGTTGCAAAATACACTGATGGAAAACTG TATGTGAAAGTGCCCTACAGGGAATCTACAGAAACGGTAGATGTTAAAATCCAGTAA
Upstream 100 bases:
>100_bases CATAAAATATAAATAAAGCGATCCCGCTATAATTATCTAGATTTGCTTTATAATTATGTCACATAAATAAGAATTATTTT ACAATACCGGGGGGTAAGAG
Downstream 100 bases:
>100_bases AAAACCGATTAAATGGAGAAAATATGCATCCAGTAATTGATTATAGCAAATGTAACGGCGCTCTTGCCTGTTATGAGGTC TGTCCTGCAGAAGTTTTTGA
Product: heat shock protein
Products: NA
Alternate protein names: Heat Shock Protein
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSMVKMSPDVLSCSDDEGNLLIEVDMVGVKKENIELKMVEEGFFIRAKKEETGVEYAGTYAFCCNVVPEKAVAKYTDGKL YVKVPYRESTETVDVKIQ
Sequences:
>Translated_98_residues MSMVKMSPDVLSCSDDEGNLLIEVDMVGVKKENIELKMVEEGFFIRAKKEETGVEYAGTYAFCCNVVPEKAVAKYTDGKL YVKVPYRESTETVDVKIQ >Mature_97_residues SMVKMSPDVLSCSDDEGNLLIEVDMVGVKKENIELKMVEEGFFIRAKKEETGVEYAGTYAFCCNVVPEKAVAKYTDGKLY VKVPYRESTETVDVKIQ
Specific function: Unknown
COG id: COG0071
COG function: function code O; Molecular chaperone (small heat shock protein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11010; Mature: 10879
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMVKMSPDVLSCSDDEGNLLIEVDMVGVKKENIELKMVEEGFFIRAKKEETGVEYAGTY CCEEECCCCEEEECCCCCCEEEEEEEEEEEECCEEEEEECCCEEEEEECCCCCCEECCEE AFCCNVVPEKAVAKYTDGKLYVKVPYRESTETVDVKIQ EEEEECCCCCCEEEECCCEEEEEECCCCCCCEEEEEEC >Mature Secondary Structure SMVKMSPDVLSCSDDEGNLLIEVDMVGVKKENIELKMVEEGFFIRAKKEETGVEYAGTY CEEECCCCEEEECCCCCCEEEEEEEEEEEECCEEEEEECCCEEEEEECCCCCCEECCEE AFCCNVVPEKAVAKYTDGKLYVKVPYRESTETVDVKIQ EEEEECCCCCCEEEECCCEEEEEECCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA