| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226590
Identifier: 21226590
GI number: 21226590
Start: 611176
End: 611370
Strand: Direct
Name: 21226590
Synonym: MM_0488
Alternate gene names: NA
Gene position: 611176-611370 (Clockwise)
Preceding gene: 21226589
Following gene: 21226591
Centisome position: 14.92
GC content: 44.62
Gene sequence:
>195_bases ATGCATCCAGTAATTGATTATAGCAAATGTAACGGCGCTCTTGCCTGTTATGAGGTCTGTCCTGCAGAAGTTTTTGATAT TGAAGAAATGAACGGGGTAAAAAAAGCAGTTGTAGCCCGCCCGGAAAACTGTATAGAATGCGAGCAATGTGTGGAAGCCT GCCCGATAGATGCTATTGAGCTGGTAGAGGAGTGA
Upstream 100 bases:
>100_bases AATACACTGATGGAAAACTGTATGTGAAAGTGCCCTACAGGGAATCTACAGAAACGGTAGATGTTAAAATCCAGTAAAAA ACCGATTAAATGGAGAAAAT
Downstream 100 bases:
>100_bases ATTTCAGACCTCCGGAAAGAATTGCCAGAAAAAGCAAACAGAGTACCCGGCAAGAGCTCAGCAGAAAAAACAGATAGAGA TTCCGGAATAAGCCGAAAAT
Product: ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MHPVIDYSKCNGALACYEVCPAEVFDIEEMNGVKKAVVARPENCIECEQCVEACPIDAIELVEE
Sequences:
>Translated_64_residues MHPVIDYSKCNGALACYEVCPAEVFDIEEMNGVKKAVVARPENCIECEQCVEACPIDAIELVEE >Mature_64_residues MHPVIDYSKCNGALACYEVCPAEVFDIEEMNGVKKAVVARPENCIECEQCVEACPIDAIELVEE
Specific function: Unknown
COG id: COG1146
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7062; Mature: 7062
Theoretical pI: Translated: 3.85; Mature: 3.85
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
10.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 14.1 %Cys+Met (Translated Protein) 10.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 14.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPVIDYSKCNGALACYEVCPAEVFDIEEMNGVKKAVVARPENCIECEQCVEACPIDAIE CCCCCCCCCCCCCCHHHHHCCCHHHCCHHHCCHHHHHHCCCCCCHHHHHHHHHCCCCHHH LVEE HHCC >Mature Secondary Structure MHPVIDYSKCNGALACYEVCPAEVFDIEEMNGVKKAVVARPENCIECEQCVEACPIDAIE CCCCCCCCCCCCCCHHHHHCCCHHHCCHHHCCHHHHHHCCCCCCHHHHHHHHHCCCCHHH LVEE HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA