Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226590

Identifier: 21226590

GI number: 21226590

Start: 611176

End: 611370

Strand: Direct

Name: 21226590

Synonym: MM_0488

Alternate gene names: NA

Gene position: 611176-611370 (Clockwise)

Preceding gene: 21226589

Following gene: 21226591

Centisome position: 14.92

GC content: 44.62

Gene sequence:

>195_bases
ATGCATCCAGTAATTGATTATAGCAAATGTAACGGCGCTCTTGCCTGTTATGAGGTCTGTCCTGCAGAAGTTTTTGATAT
TGAAGAAATGAACGGGGTAAAAAAAGCAGTTGTAGCCCGCCCGGAAAACTGTATAGAATGCGAGCAATGTGTGGAAGCCT
GCCCGATAGATGCTATTGAGCTGGTAGAGGAGTGA

Upstream 100 bases:

>100_bases
AATACACTGATGGAAAACTGTATGTGAAAGTGCCCTACAGGGAATCTACAGAAACGGTAGATGTTAAAATCCAGTAAAAA
ACCGATTAAATGGAGAAAAT

Downstream 100 bases:

>100_bases
ATTTCAGACCTCCGGAAAGAATTGCCAGAAAAAGCAAACAGAGTACCCGGCAAGAGCTCAGCAGAAAAAACAGATAGAGA
TTCCGGAATAAGCCGAAAAT

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MHPVIDYSKCNGALACYEVCPAEVFDIEEMNGVKKAVVARPENCIECEQCVEACPIDAIELVEE

Sequences:

>Translated_64_residues
MHPVIDYSKCNGALACYEVCPAEVFDIEEMNGVKKAVVARPENCIECEQCVEACPIDAIELVEE
>Mature_64_residues
MHPVIDYSKCNGALACYEVCPAEVFDIEEMNGVKKAVVARPENCIECEQCVEACPIDAIELVEE

Specific function: Unknown

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7062; Mature: 7062

Theoretical pI: Translated: 3.85; Mature: 3.85

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
14.1 %Cys+Met (Translated Protein)
10.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
14.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPVIDYSKCNGALACYEVCPAEVFDIEEMNGVKKAVVARPENCIECEQCVEACPIDAIE
CCCCCCCCCCCCCCHHHHHCCCHHHCCHHHCCHHHHHHCCCCCCHHHHHHHHHCCCCHHH
LVEE
HHCC
>Mature Secondary Structure
MHPVIDYSKCNGALACYEVCPAEVFDIEEMNGVKKAVVARPENCIECEQCVEACPIDAIE
CCCCCCCCCCCCCCHHHHHCCCHHHCCHHHCCHHHHHHCCCCCCHHHHHHHHHCCCCHHH
LVEE
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA