Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is pgk [H]
Identifier: 21226587
GI number: 21226587
Start: 608492
End: 609742
Strand: Reverse
Name: pgk [H]
Synonym: MM_0485
Alternate gene names: 21226587
Gene position: 609742-608492 (Counterclockwise)
Preceding gene: 21226592
Following gene: 21226586
Centisome position: 14.89
GC content: 46.84
Gene sequence:
>1251_bases GTGCTGAGGGTAATGACTTCCAGAAACTTTCTTACGATCGATGATTTTGACATACGCGGAAAGACGATTCTTTTAAGGGT CGACATGAACTCTCCTATGGACACTCAGGGTCACATTCTGGACGATATGAGGATCAGGAGTCATATTGCCACTCTTAAAG ACCTTGAGAGTGCAAAAGTCGTTGTGCTTGCGCACCAGAGCCGGCCTGGGAAAAAAGACTTCACCACTATGAAACCTCAT GCTCACCTGCTGTCCAGGTATCTGGGCAGGCAAGTTACTTATGTGGACGACATCTTCGGGACTTTTGCGAAGACTCAGAT CGCTTCTATGGAAGACGGGGACGTCATCATGCTCGAAAACGTCAGGTTCTATTCTGAAGAGAGCCTCGAGAGGACTACAG CCGAGCAGGCCAATACTTTTATGGTTAAAAAACTGGCACCCTTTGTTGATATTTTCCTTAATGACGCGTTTGCGGTATCT CACAGGTCTCATCTCTCTGTTGTAGGCTTTACCGAAGTCCTCCCTTCCGGAGCAGGCAGGGTAATGGAAAAAGAACTTAT TTCCCTGGAAAAAGGAGTTAAAAGTGGAGAGAGGCCAAGCGTTTTCGTGCTGGGGGGGGCAAAAGTGGACGACTCACTTA GAGTAACCGAAAATGTCCTCACAAACGGGGGAGCTGACAGAGTCCTCCTTACAGGGGTAGTTGCAAACGTTGCCCTTGCC GCTTCCGGAGTAAATATAGGAAAAGCCAATCTGGATTTCATTAAATCCCAGGGCTACGAAGACCAGATAGAAAGGGCGAG AGGTTTGCTTGCGAAGTTCGAAGATAAAATCGGACTTCCGAAAGACGTTGCTTTAAATGATAACAAAAAGCGTGTTGAAG CTCCTATTTCCGAACTTAATTCCGATTCTCTGCCCATTAACGATATAGGTCTTGAAACCATTGTGGACTACACCAATGAA ATCCAGAATGCCAAAACAGTTGTCCTGAACGGCCCTGCCGGGGTTTCAGAGATTGAGGACTTTGCCCTCGGAACCCATGA AATTATAAAAGCTGCTATTAAATCCGATTTCTCTATCATTGGCGGCGGGCATATCTCTGTGGAAGTTGCACACCTCGGGC TTGAACACCGCTTTTCACACATAAGCACTGGAGGAGGAGCCTGTATTGATTTCCTTGCAGGGGAAAAGCTGCCAGGCGTC GAAGCTCTCAAGGCTGCTTACAATAAGTATCAGGAAGCTAAAAAGCTTTAA
Upstream 100 bases:
>100_bases TTCCATGACAAGATAACCAATACTGAAAGAATAAGATTCTCTTAAATTTTATTTATCAAGCTTTATTCTTCGATATATAT AAAATTTTGTTTACAAAGGT
Downstream 100 bases:
>100_bases AGGCCTGTTTCCTGCAGCTTCCGGCAATGCCAGAAACCTACTTTAACCAGCTTCGATAAACATACTGTTACACCGGCGCA CAGACATACAAGTAAACAGA
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MLRVMTSRNFLTIDDFDIRGKTILLRVDMNSPMDTQGHILDDMRIRSHIATLKDLESAKVVVLAHQSRPGKKDFTTMKPH AHLLSRYLGRQVTYVDDIFGTFAKTQIASMEDGDVIMLENVRFYSEESLERTTAEQANTFMVKKLAPFVDIFLNDAFAVS HRSHLSVVGFTEVLPSGAGRVMEKELISLEKGVKSGERPSVFVLGGAKVDDSLRVTENVLTNGGADRVLLTGVVANVALA ASGVNIGKANLDFIKSQGYEDQIERARGLLAKFEDKIGLPKDVALNDNKKRVEAPISELNSDSLPINDIGLETIVDYTNE IQNAKTVVLNGPAGVSEIEDFALGTHEIIKAAIKSDFSIIGGGHISVEVAHLGLEHRFSHISTGGGACIDFLAGEKLPGV EALKAAYNKYQEAKKL
Sequences:
>Translated_416_residues MLRVMTSRNFLTIDDFDIRGKTILLRVDMNSPMDTQGHILDDMRIRSHIATLKDLESAKVVVLAHQSRPGKKDFTTMKPH AHLLSRYLGRQVTYVDDIFGTFAKTQIASMEDGDVIMLENVRFYSEESLERTTAEQANTFMVKKLAPFVDIFLNDAFAVS HRSHLSVVGFTEVLPSGAGRVMEKELISLEKGVKSGERPSVFVLGGAKVDDSLRVTENVLTNGGADRVLLTGVVANVALA ASGVNIGKANLDFIKSQGYEDQIERARGLLAKFEDKIGLPKDVALNDNKKRVEAPISELNSDSLPINDIGLETIVDYTNE IQNAKTVVLNGPAGVSEIEDFALGTHEIIKAAIKSDFSIIGGGHISVEVAHLGLEHRFSHISTGGGACIDFLAGEKLPGV EALKAAYNKYQEAKKL >Mature_416_residues MLRVMTSRNFLTIDDFDIRGKTILLRVDMNSPMDTQGHILDDMRIRSHIATLKDLESAKVVVLAHQSRPGKKDFTTMKPH AHLLSRYLGRQVTYVDDIFGTFAKTQIASMEDGDVIMLENVRFYSEESLERTTAEQANTFMVKKLAPFVDIFLNDAFAVS HRSHLSVVGFTEVLPSGAGRVMEKELISLEKGVKSGERPSVFVLGGAKVDDSLRVTENVLTNGGADRVLLTGVVANVALA ASGVNIGKANLDFIKSQGYEDQIERARGLLAKFEDKIGLPKDVALNDNKKRVEAPISELNSDSLPINDIGLETIVDYTNE IQNAKTVVLNGPAGVSEIEDFALGTHEIIKAAIKSDFSIIGGGHISVEVAHLGLEHRFSHISTGGGACIDFLAGEKLPGV EALKAAYNKYQEAKKL
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4505763, Length=426, Percent_Identity=33.8028169014084, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI31543397, Length=423, Percent_Identity=32.8605200945626, Blast_Score=187, Evalue=2e-47, Organism=Escherichia coli, GI1789294, Length=416, Percent_Identity=31.4903846153846, Blast_Score=164, Evalue=9e-42, Organism=Caenorhabditis elegans, GI17508823, Length=426, Percent_Identity=33.8028169014084, Blast_Score=199, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6319857, Length=421, Percent_Identity=31.8289786223278, Blast_Score=176, Evalue=5e-45, Organism=Drosophila melanogaster, GI17136394, Length=423, Percent_Identity=33.806146572104, Blast_Score=180, Evalue=1e-45, Organism=Drosophila melanogaster, GI24581203, Length=419, Percent_Identity=31.0262529832936, Blast_Score=170, Evalue=2e-42,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 45391; Mature: 45391
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRVMTSRNFLTIDDFDIRGKTILLRVDMNSPMDTQGHILDDMRIRSHIATLKDLESAKV CEEEEECCCEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE VVLAHQSRPGKKDFTTMKPHAHLLSRYLGRQVTYVDDIFGTFAKTQIASMEDGDVIMLEN EEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC VRFYSEESLERTTAEQANTFMVKKLAPFVDIFLNDAFAVSHRSHLSVVGFTEVLPSGAGR EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCEEEEEHHHHCCCCCCH VMEKELISLEKGVKSGERPSVFVLGGAKVDDSLRVTENVLTNGGADRVLLTGVVANVALA HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH ASGVNIGKANLDFIKSQGYEDQIERARGLLAKFEDKIGLPKDVALNDNKKRVEAPISELN HCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHCCHHHCC SDSLPINDIGLETIVDYTNEIQNAKTVVLNGPAGVSEIEDFALGTHEIIKAAIKSDFSII CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHHHCCCEEE GGGHISVEVAHLGLEHRFSHISTGGGACIDFLAGEKLPGVEALKAAYNKYQEAKKL ECCEEEEEEEECCHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLRVMTSRNFLTIDDFDIRGKTILLRVDMNSPMDTQGHILDDMRIRSHIATLKDLESAKV CEEEEECCCEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE VVLAHQSRPGKKDFTTMKPHAHLLSRYLGRQVTYVDDIFGTFAKTQIASMEDGDVIMLEN EEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC VRFYSEESLERTTAEQANTFMVKKLAPFVDIFLNDAFAVSHRSHLSVVGFTEVLPSGAGR EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCEEEEEHHHHCCCCCCH VMEKELISLEKGVKSGERPSVFVLGGAKVDDSLRVTENVLTNGGADRVLLTGVVANVALA HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH ASGVNIGKANLDFIKSQGYEDQIERARGLLAKFEDKIGLPKDVALNDNKKRVEAPISELN HCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHCCHHHCC SDSLPINDIGLETIVDYTNEIQNAKTVVLNGPAGVSEIEDFALGTHEIIKAAIKSDFSII CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHHHCCCEEE GGGHISVEVAHLGLEHRFSHISTGGGACIDFLAGEKLPGVEALKAAYNKYQEAKKL ECCEEEEEEEECCHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]