Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21226535

Identifier: 21226535

GI number: 21226535

Start: 553033

End: 553830

Strand: Direct

Name: 21226535

Synonym: MM_0433

Alternate gene names: NA

Gene position: 553033-553830 (Clockwise)

Preceding gene: 21226534

Following gene: 21226536

Centisome position: 13.5

GC content: 37.22

Gene sequence:

>798_bases
ATGCCTATTATGAGTATTATTTCATGCAAGATAATGCAGGACGAAATTATCTGGATTCTTGAAAATGACTCTTCCATTGA
TGAGACCATTATAATTGATAGTGAAAATATCCTGGAATTCGTAGAAAAACTGGATAAAGTAAACCTCCAGTATAAAGTGC
TATCCCTGGAAGATATTTCCTCACTTGCAGAAATCAGAAGTGAATGCAAAAACTACACAGTTATGATTCATCTGATGGAA
CTGGGTCTTCATAGAAGTCCTAAAGAATTGAAAATCAAGGTATATGAGACTATAAAGACTCTTGCTCCTTTTTCTTCGGG
AATTTTGCTCTTTTACGGATTGTGTGGGAATGTGCTGGGAGATGTTGAAAAAGATTTCGAGCGCAGTTCAACCTCATGTC
CGGTCCGTATTCTTAAAGACAAGGATCACAGGATTGTAGATGACTGTATAGGAGCTACTGTGGGAGGAGTTAATAACTAT
CTAAGGATACTTAAAAGTGTCAGTGACGCTGGAACATATCTTTTTACCCCCATGTACAGCAAGGGCTGGAGGGAACTGCT
TGACCTGAATAAGCTAAACAAAGACCCCTCAAAAGCATTGAAATTAATGAAAAAAACCCATGAAATGATAGGTTACAAAA
GGGTTGCAAAGATTAACACCGGACTTGAATACACTGAGAATTTCGATGCTTCTATTCAAGAATTTGCAGAGTTATTTGAT
TTCGAAATCCTGGAATTTGATGACGGCAATCAGAAAATTTTTGAAGATTGCTATAACGAACTCAAAGCGGAACTTTAG

Upstream 100 bases:

>100_bases
GAAGGATTGATTTTTTGCGAGTTCCTACTTACTTATATGTAAGTAAGTAAGTAAGTAAGTAAGGTATTCTAATATACTGA
TTTTATAGAGGAGAAATTTG

Downstream 100 bases:

>100_bases
GAAAAATCAAAAGGTTGAATAGATTTGGTATTTATAAACTAATGGTGAGAGGATGTCTGTACTCAGCATAATTGCCTGTG
AAATGCTTGAAGACGAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MPIMSIISCKIMQDEIIWILENDSSIDETIIIDSENILEFVEKLDKVNLQYKVLSLEDISSLAEIRSECKNYTVMIHLME
LGLHRSPKELKIKVYETIKTLAPFSSGILLFYGLCGNVLGDVEKDFERSSTSCPVRILKDKDHRIVDDCIGATVGGVNNY
LRILKSVSDAGTYLFTPMYSKGWRELLDLNKLNKDPSKALKLMKKTHEMIGYKRVAKINTGLEYTENFDASIQEFAELFD
FEILEFDDGNQKIFEDCYNELKAEL

Sequences:

>Translated_265_residues
MPIMSIISCKIMQDEIIWILENDSSIDETIIIDSENILEFVEKLDKVNLQYKVLSLEDISSLAEIRSECKNYTVMIHLME
LGLHRSPKELKIKVYETIKTLAPFSSGILLFYGLCGNVLGDVEKDFERSSTSCPVRILKDKDHRIVDDCIGATVGGVNNY
LRILKSVSDAGTYLFTPMYSKGWRELLDLNKLNKDPSKALKLMKKTHEMIGYKRVAKINTGLEYTENFDASIQEFAELFD
FEILEFDDGNQKIFEDCYNELKAEL
>Mature_264_residues
PIMSIISCKIMQDEIIWILENDSSIDETIIIDSENILEFVEKLDKVNLQYKVLSLEDISSLAEIRSECKNYTVMIHLMEL
GLHRSPKELKIKVYETIKTLAPFSSGILLFYGLCGNVLGDVEKDFERSSTSCPVRILKDKDHRIVDDCIGATVGGVNNYL
RILKSVSDAGTYLFTPMYSKGWRELLDLNKLNKDPSKALKLMKKTHEMIGYKRVAKINTGLEYTENFDASIQEFAELFDF
EILEFDDGNQKIFEDCYNELKAEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30379; Mature: 30248

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIMSIISCKIMQDEIIWILENDSSIDETIIIDSENILEFVEKLDKVNLQYKVLSLEDIS
CCCHHHHHHHEECCEEEEEEECCCCCCCEEEECCHHHHHHHHHHHHCCCEEEEECHHHHH
SLAEIRSECKNYTVMIHLMELGLHRSPKELKIKVYETIKTLAPFSSGILLFYGLCGNVLG
HHHHHHHHHCCHHHEEEEHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
DVEKDFERSSTSCPVRILKDKDHRIVDDCIGATVGGVNNYLRILKSVSDAGTYLFTPMYS
HHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHH
KGWRELLDLNKLNKDPSKALKLMKKTHEMIGYKRVAKINTGLEYTENFDASIQEFAELFD
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC
FEILEFDDGNQKIFEDCYNELKAEL
CEEEEECCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PIMSIISCKIMQDEIIWILENDSSIDETIIIDSENILEFVEKLDKVNLQYKVLSLEDIS
CCHHHHHHHEECCEEEEEEECCCCCCCEEEECCHHHHHHHHHHHHCCCEEEEECHHHHH
SLAEIRSECKNYTVMIHLMELGLHRSPKELKIKVYETIKTLAPFSSGILLFYGLCGNVLG
HHHHHHHHHCCHHHEEEEHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
DVEKDFERSSTSCPVRILKDKDHRIVDDCIGATVGGVNNYLRILKSVSDAGTYLFTPMYS
HHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHH
KGWRELLDLNKLNKDPSKALKLMKKTHEMIGYKRVAKINTGLEYTENFDASIQEFAELFD
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC
FEILEFDDGNQKIFEDCYNELKAEL
CEEEEECCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA