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The map label for this gene is 21226534

Identifier: 21226534

GI number: 21226534

Start: 552346

End: 552924

Strand: Direct

Name: 21226534

Synonym: MM_0432

Alternate gene names: NA

Gene position: 552346-552924 (Clockwise)

Preceding gene: 21226533

Following gene: 21226535

Centisome position: 13.48

GC content: 38.86

Gene sequence:

>579_bases
ATGAAAGATATAAACCAGACCAATCAACAGATACTCTACTACGCAAGGAATTTTCTGCAATGCAGAGGTTATAACGGATT
CAGTTACAAAGATATCTCTCAGAAATTGGGAATAAAAAATGCAGCAATTCATAATTACTATCCCAAAAAAGAAGATCTGG
TTGCAGCCCTGCTTGAAGACAGCAGAAAGAAATTAGCTGAAAATATTGCACAAATAGTTGAATCTGGAGGCTCAGCCCGT
GAGCAACTTCAATACTATTTTGATTATGCGTTGAAGGAGTTTGATGAAGGCAAAAGTATCTGCCCTCCAGGCTCTGTGAT
TCTCGATTTTGAAGAACTTCCTGAGAAAGTTAAAAAGCAGAATCTGTTACTGCTGGATGATATCTTGACCTGGATATCTG
GAGTTCTTAAAGCCGGTCTGGAACAGGGAGAATTTAGTTTTTCTGATTCTGTAGAAGCACGTGCAGAATTAGTAGTTGAA
GCCTTAATGGGTGCCAGGCAACTATCCAGCATTAAAGGGAGAAAAACACTCGTGAGATCCATTTCTTTAATTAAATCCGA
CCTTGGGTGGAAAAATTGA

Upstream 100 bases:

>100_bases
TTCAAATTCGTGGACAAATTAATGAATATTCAGCTCGAGAAACTAACATTTATATGACTGGACATCCCTTTGTTACTTAC
TAATAAGTAAGTGTGCTGTT

Downstream 100 bases:

>100_bases
TATTTACGGAAGGATTGATTTTTTGCGAGTTCCTACTTACTTATATGTAAGTAAGTAAGTAAGTAAGTAAGGTATTCTAA
TATACTGATTTTATAGAGGA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Regulatory Protein; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Protein; Regulatory Protein TetR; Transcriptional Regulatory Protein; Regulatory Protein Tetr; HTH-Type Protein SlmA; AcrR Family Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator Protein Tetr Family

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKDINQTNQQILYYARNFLQCRGYNGFSYKDISQKLGIKNAAIHNYYPKKEDLVAALLEDSRKKLAENIAQIVESGGSAR
EQLQYYFDYALKEFDEGKSICPPGSVILDFEELPEKVKKQNLLLLDDILTWISGVLKAGLEQGEFSFSDSVEARAELVVE
ALMGARQLSSIKGRKTLVRSISLIKSDLGWKN

Sequences:

>Translated_192_residues
MKDINQTNQQILYYARNFLQCRGYNGFSYKDISQKLGIKNAAIHNYYPKKEDLVAALLEDSRKKLAENIAQIVESGGSAR
EQLQYYFDYALKEFDEGKSICPPGSVILDFEELPEKVKKQNLLLLDDILTWISGVLKAGLEQGEFSFSDSVEARAELVVE
ALMGARQLSSIKGRKTLVRSISLIKSDLGWKN
>Mature_192_residues
MKDINQTNQQILYYARNFLQCRGYNGFSYKDISQKLGIKNAAIHNYYPKKEDLVAALLEDSRKKLAENIAQIVESGGSAR
EQLQYYFDYALKEFDEGKSICPPGSVILDFEELPEKVKKQNLLLLDDILTWISGVLKAGLEQGEFSFSDSVEARAELVVE
ALMGARQLSSIKGRKTLVRSISLIKSDLGWKN

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21705; Mature: 21705

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDINQTNQQILYYARNFLQCRGYNGFSYKDISQKLGIKNAAIHNYYPKKEDLVAALLED
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHH
SRKKLAENIAQIVESGGSAREQLQYYFDYALKEFDEGKSICPPGSVILDFEELPEKVKKQ
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHC
NLLLLDDILTWISGVLKAGLEQGEFSFSDSVEARAELVVEALMGARQLSSIKGRKTLVRS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISLIKSDLGWKN
HHHHHHHCCCCC
>Mature Secondary Structure
MKDINQTNQQILYYARNFLQCRGYNGFSYKDISQKLGIKNAAIHNYYPKKEDLVAALLED
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHH
SRKKLAENIAQIVESGGSAREQLQYYFDYALKEFDEGKSICPPGSVILDFEELPEKVKKQ
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHC
NLLLLDDILTWISGVLKAGLEQGEFSFSDSVEARAELVVEALMGARQLSSIKGRKTLVRS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISLIKSDLGWKN
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA