| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226481
Identifier: 21226481
GI number: 21226481
Start: 486587
End: 486943
Strand: Reverse
Name: 21226481
Synonym: MM_0379
Alternate gene names: NA
Gene position: 486943-486587 (Counterclockwise)
Preceding gene: 21226482
Following gene: 21226480
Centisome position: 11.89
GC content: 45.1
Gene sequence:
>357_bases ATGGCACTGTCGTCTCTTTCGACAGCATACGTATTTTTCGGTTCGGAACTTGCAGGTGCGGGACAATCAGGAGAAAGAGC CCTTCAATACACCCACGAATCAGGTGTTGGGGAAAAAGTAACTCTTGACGCTGAGGTTTTAAGCAAGAGGTTTACATACA CCGGAGAGCACCTCCTTTTAGATGTGGATTTCGACTCGGAAGTCCTGAGCGTTTTTATCCCGAAGAACGCAGGAGCTGAA GCCCTGAACAGCATGATCCATGAAGGGGACCTAATAAGCATAACAGGTACTGTCTCAGAATATAAGGGGAAAAAAGAGAT AAATGTGGAAAAGAAAGAAGATATCACGCTGAAGTAA
Upstream 100 bases:
>100_bases TTATCTTCATTAAAATTCAATATAAGTTAATTCAGGAACCAAGACTGGACAGTGATGAAAGATGGAAAAGGAAGAGAAAG TCGTGGTGGTGCTGCTTATT
Downstream 100 bases:
>100_bases TACCTTGCTATGAAAACCGACATTTTATCATTAAATTTTACGGTATCACCCTCTCTCTGGAATAACCGTTATCAATAAAC TTCAAAATGGAACAATATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MALSSLSTAYVFFGSELAGAGQSGERALQYTHESGVGEKVTLDAEVLSKRFTYTGEHLLLDVDFDSEVLSVFIPKNAGAE ALNSMIHEGDLISITGTVSEYKGKKEINVEKKEDITLK
Sequences:
>Translated_118_residues MALSSLSTAYVFFGSELAGAGQSGERALQYTHESGVGEKVTLDAEVLSKRFTYTGEHLLLDVDFDSEVLSVFIPKNAGAE ALNSMIHEGDLISITGTVSEYKGKKEINVEKKEDITLK >Mature_117_residues ALSSLSTAYVFFGSELAGAGQSGERALQYTHESGVGEKVTLDAEVLSKRFTYTGEHLLLDVDFDSEVLSVFIPKNAGAEA LNSMIHEGDLISITGTVSEYKGKKEINVEKKEDITLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12774; Mature: 12643
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSSLSTAYVFFGSELAGAGQSGERALQYTHESGVGEKVTLDAEVLSKRFTYTGEHLLL CCCCCCCEEEEEECCCCCCCCCCCCHHEEECCCCCCCCEEEECHHHHHHHCCCCCCEEEE DVDFDSEVLSVFIPKNAGAEALNSMIHEGDLISITGTVSEYKGKKEINVEKKEDITLK EECCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEEECHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure ALSSLSTAYVFFGSELAGAGQSGERALQYTHESGVGEKVTLDAEVLSKRFTYTGEHLLL CCCCCCEEEEEECCCCCCCCCCCCHHEEECCCCCCCCEEEECHHHHHHHCCCCCCEEEE DVDFDSEVLSVFIPKNAGAEALNSMIHEGDLISITGTVSEYKGKKEINVEKKEDITLK EECCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEEECHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA