| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is glmU [H]
Identifier: 21226480
GI number: 21226480
Start: 485270
End: 486448
Strand: Reverse
Name: glmU [H]
Synonym: MM_0378
Alternate gene names: 21226480
Gene position: 486448-485270 (Counterclockwise)
Preceding gene: 21226481
Following gene: 21226479
Centisome position: 11.88
GC content: 45.89
Gene sequence:
>1179_bases ATGAAAGCATGTATCATGTGCGGAGGTGCAGGGACAAGGCTCAGACCGCTGACCTTCAAACACCCTAAACCCAGCATACC GATTCTCAATAAACCGTCAGTAAGGCACCTGATAGAGCACCTTTCAAGAGAAGGGTTCAATGAAATAGTTATGACCCTGG GATATATGGGGGAGCGCATAGAAGAACAGCTCGGGGACGGGCACATATTCGGGGTACATATTGAGTATGTGTATGAAAAG GAGAAGATGGGCACTGCAGGCGGGGTTAAAAACGCAGAGGAGTATCTGAAAAATGAGCCTTTTATCGTGCTTGGGGGAGA CCACGTACTTAACCTTGACCTGAGGGAGATGTACCGTTTTCACGAGACCAATGACGCAATAGTGACCATAGGGCTACTTT CAATTGATGACCCGAGAGAATTCGGGATTGCGGATATGGATATAAATAACAGGATCCACCGCTTCCTCGAAAAACCCAAG TCCGGGCAAATTTTTAGCAACCTTGCAAGTACAGGCATTTACATCTGTGACCCCGAAATCTTCGACTGGATACCCGAGAA TAAAAAGTATGATTTTGCAAAAGACCTTTTCCCTTCCCTGCTTGCAGCAGATGAAAAAATTAACGGCATGCTTGTCCGGG GGAAATGGACTGATGTAGGGAGTTCGGCAGCTTACAGGCAGGCCCAGCGCTGGATGCTTGACGCTCTTCCCGGGACCACT ATAGAAGGAAACTTTACGACAAGAAACGCAAGAATACGCGGGCCTTTATCCATAGGAAACAACGTTTGCATAGGTTCGAA TTCTTCCCTTGTAGGACCGATTGTTATAGGGGAAAACACTGTAATAGGTGACAACGTCCTTGTGGGGCCTTACAGCGTAA TAGGCGCGAACTGCACTATTGACGACAATGCAAAAATTCTTTCATCCTATCTTTTTGATTATGTCTCTATAGGAAAAGGC TCCAATATCTCAGGGTCAGTGGTTGCCGATGAAACAGCTGTAGGGGAAAAATGCAGCCTTGAAAACGGGACAGTGATCGG GCACAGAGTGACCATAGGAGATAACTCCACCATACATTCGGGAGTTAAAATATGGCCTGAAGTGATAATTGATAATGATT CCAGTATAGAGGAAACAATTGTTAACCTCAATTATGATACCTCACAGGAAGGGTCGTGA
Upstream 100 bases:
>100_bases TACGGTATCACCCTCTCTCTGGAATAACCGTTATCAATAAACTTCAAAATGGAACAATATATCGTTAACAATATATCCAT AGAACAACATTGGGAAAAAT
Downstream 100 bases:
>100_bases ACAGGGCTTAAAAGTCGGGTTTCCAGGATCAGGTACATATTTCCGGTAAAATGTGTTTTCATAGTTGTTTCGGGTTTAAA AAGGAGAACTTTTAATAAAT
Product: sugar-phosphate nucleotydyl transferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine pyrophosphorylase; N-acetylglucosamine-1-phosphate uridyltransferase; Glucosamine-1-phosphate N-acetyltransferase [H]
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MKACIMCGGAGTRLRPLTFKHPKPSIPILNKPSVRHLIEHLSREGFNEIVMTLGYMGERIEEQLGDGHIFGVHIEYVYEK EKMGTAGGVKNAEEYLKNEPFIVLGGDHVLNLDLREMYRFHETNDAIVTIGLLSIDDPREFGIADMDINNRIHRFLEKPK SGQIFSNLASTGIYICDPEIFDWIPENKKYDFAKDLFPSLLAADEKINGMLVRGKWTDVGSSAAYRQAQRWMLDALPGTT IEGNFTTRNARIRGPLSIGNNVCIGSNSSLVGPIVIGENTVIGDNVLVGPYSVIGANCTIDDNAKILSSYLFDYVSIGKG SNISGSVVADETAVGEKCSLENGTVIGHRVTIGDNSTIHSGVKIWPEVIIDNDSSIEETIVNLNYDTSQEGS
Sequences:
>Translated_392_residues MKACIMCGGAGTRLRPLTFKHPKPSIPILNKPSVRHLIEHLSREGFNEIVMTLGYMGERIEEQLGDGHIFGVHIEYVYEK EKMGTAGGVKNAEEYLKNEPFIVLGGDHVLNLDLREMYRFHETNDAIVTIGLLSIDDPREFGIADMDINNRIHRFLEKPK SGQIFSNLASTGIYICDPEIFDWIPENKKYDFAKDLFPSLLAADEKINGMLVRGKWTDVGSSAAYRQAQRWMLDALPGTT IEGNFTTRNARIRGPLSIGNNVCIGSNSSLVGPIVIGENTVIGDNVLVGPYSVIGANCTIDDNAKILSSYLFDYVSIGKG SNISGSVVADETAVGEKCSLENGTVIGHRVTIGDNSTIHSGVKIWPEVIIDNDSSIEETIVNLNYDTSQEGS >Mature_392_residues MKACIMCGGAGTRLRPLTFKHPKPSIPILNKPSVRHLIEHLSREGFNEIVMTLGYMGERIEEQLGDGHIFGVHIEYVYEK EKMGTAGGVKNAEEYLKNEPFIVLGGDHVLNLDLREMYRFHETNDAIVTIGLLSIDDPREFGIADMDINNRIHRFLEKPK SGQIFSNLASTGIYICDPEIFDWIPENKKYDFAKDLFPSLLAADEKINGMLVRGKWTDVGSSAAYRQAQRWMLDALPGTT IEGNFTTRNARIRGPLSIGNNVCIGSNSSLVGPIVIGENTVIGDNVLVGPYSVIGANCTIDDNAKILSSYLFDYVSIGKG SNISGSVVADETAVGEKCSLENGTVIGHRVTIGDNSTIHSGVKIWPEVIIDNDSSIEETIVNLNYDTSQEGS
Specific function: Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetyl-glucosamine (UDP- GlcNAc). Responsible for the acetylation of GlcN-1-P to GlcNAc-1- P, and for the uridyl transfer from UTP to GlcNAc-1-P, to produce UDP-GlcN
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=360, Percent_Identity=28.3333333333333, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI11761619, Length=380, Percent_Identity=28.4210526315789, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI31881779, Length=363, Percent_Identity=24.2424242424242, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI45447090, Length=363, Percent_Identity=24.2424242424242, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI83267879, Length=408, Percent_Identity=20.8333333333333, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI1789837, Length=398, Percent_Identity=25.3768844221106, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1790224, Length=194, Percent_Identity=31.4432989690722, Blast_Score=85, Evalue=8e-18, Organism=Escherichia coli, GI1788351, Length=247, Percent_Identity=26.3157894736842, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI133931050, Length=357, Percent_Identity=30.5322128851541, Blast_Score=171, Evalue=5e-43, Organism=Caenorhabditis elegans, GI17509979, Length=351, Percent_Identity=25.6410256410256, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17509981, Length=338, Percent_Identity=25.1479289940828, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6320148, Length=386, Percent_Identity=33.6787564766839, Blast_Score=177, Evalue=3e-45, Organism=Drosophila melanogaster, GI21355443, Length=364, Percent_Identity=30.2197802197802, Blast_Score=155, Evalue=3e-38, Organism=Drosophila melanogaster, GI24644084, Length=364, Percent_Identity=30.2197802197802, Blast_Score=155, Evalue=3e-38, Organism=Drosophila melanogaster, GI24653912, Length=368, Percent_Identity=25.2717391304348, Blast_Score=99, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 - InterPro: IPR011004 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.23; =2.3.1.157 [H]
Molecular weight: Translated: 43026; Mature: 43026
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKACIMCGGAGTRLRPLTFKHPKPSIPILNKPSVRHLIEHLSREGFNEIVMTLGYMGERI CCEEEEECCCCCEECCEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH EEQLGDGHIFGVHIEYVYEKEKMGTAGGVKNAEEYLKNEPFIVLGGDHVLNLDLREMYRF HHHHCCCCEEEEEEEEEEEHHHCCCCCCCCCHHHHHCCCCEEEECCCEEEECCHHHHHHH HETNDAIVTIGLLSIDDPREFGIADMDINNRIHRFLEKPKSGQIFSNLASTGIYICDPEI HCCCCEEEEEEEEECCCCHHCCEEECCHHHHHHHHHHCCCCCHHHHHHHHCCEEEECCHH FDWIPENKKYDFAKDLFPSLLAADEKINGMLVRGKWTDVGSSAAYRQAQRWMLDALPGTT HHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCE IEGNFTTRNARIRGPLSIGNNVCIGSNSSLVGPIVIGENTVIGDNVLVGPYSVIGANCTI EECCEEECCCEEEECCCCCCEEEECCCCCEEEEEEECCCEEECCCEEECCHHHEECCEEE DDNAKILSSYLFDYVSIGKGSNISGSVVADETAVGEKCSLENGTVIGHRVTIGDNSTIHS CCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCC GVKIWPEVIIDNDSSIEETIVNLNYDTSQEGS CCEECEEEEECCCCCHHHHEEECCCCCCCCCC >Mature Secondary Structure MKACIMCGGAGTRLRPLTFKHPKPSIPILNKPSVRHLIEHLSREGFNEIVMTLGYMGERI CCEEEEECCCCCEECCEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH EEQLGDGHIFGVHIEYVYEKEKMGTAGGVKNAEEYLKNEPFIVLGGDHVLNLDLREMYRF HHHHCCCCEEEEEEEEEEEHHHCCCCCCCCCHHHHHCCCCEEEECCCEEEECCHHHHHHH HETNDAIVTIGLLSIDDPREFGIADMDINNRIHRFLEKPKSGQIFSNLASTGIYICDPEI HCCCCEEEEEEEEECCCCHHCCEEECCHHHHHHHHHHCCCCCHHHHHHHHCCEEEECCHH FDWIPENKKYDFAKDLFPSLLAADEKINGMLVRGKWTDVGSSAAYRQAQRWMLDALPGTT HHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCE IEGNFTTRNARIRGPLSIGNNVCIGSNSSLVGPIVIGENTVIGDNVLVGPYSVIGANCTI EECCEEECCCEEEECCCCCCEEEECCCCCEEEEEEECCCEEECCCEEECCHHHEECCEEE DDNAKILSSYLFDYVSIGKGSNISGSVVADETAVGEKCSLENGTVIGHRVTIGDNSTIHS CCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCC GVKIWPEVIIDNDSSIEETIVNLNYDTSQEGS CCEECEEEEECCCCCHHHHEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]