Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226417
Identifier: 21226417
GI number: 21226417
Start: 421724
End: 422695
Strand: Reverse
Name: 21226417
Synonym: MM_0315
Alternate gene names: NA
Gene position: 422695-421724 (Counterclockwise)
Preceding gene: 21226418
Following gene: 21226412
Centisome position: 10.32
GC content: 34.67
Gene sequence:
>972_bases ATGGATTTAATAACTATATACGAAACAAATTTTACAATATTCATAGGTATTTTTGTAACTCTGGCTGTAATGGGGACAAC AACTCTATACGATAGATATGAAAGTAAAGGAGGAGCCTCATTCGATCTTATGAAAATTAAACTCTTTTCGAATCAGAACC AGCAAACAGCAGCTTTCGGCTCTAAAAGTTTGAAACAGTTTTCTGATTACAGTAAAAAATTTAGCAGTTTAATCCTGAAT AAGTCCATCTCAGGTCAGGAAAAGTCCAGTTCAATGAAGAAAAAATCCACCTCAATCCGGAGTAACTCCAATAATAATTC CTTCGAAAGAGTGGAAAAAATACTCTTTAAAGCAAAAGATGCTGTTCAGAATCTTTTTGTTAACCTCCGCAGTAAAACTT TATCCCTTTCATCAGCTTTACCCCGCAGAAGCAGTAAAGATAAGGAAAAATTTGTTTCTTTATCTGATACCCAGAAAGCA GATCTAAATTTCAGTGCTGCTGACAAAGCTAACACTCTTGATAAAGTAGTCGAATCCAAAAAAGATGAATTAGATTTTGA TGACGACCTTCTAACTAAAATGTCTACTTCAGACACTTTAACAGTCAGCAGTCCTGAACTTAAGACTGTAGAGCCGTCTC TTGGTGGTATGTCTCTGGATCTAGATGCATCATTTGATACCGATTTTAAGTTAGATGAAAATGAATTTGCGATTAAAGTT GATGGACTGGATGATGAACCTGATGAAAATAACTTCAAATTTAGCGGGAACACTGAAGAAATAAAGTTTGGTGACGAAAG TGATAATTTCTTAGCTTCACTGAAGAAAGATATCATAATTAAAAAAGAGAAAACGATCAATTTCATGGATAATATGCAGG GAGAAAATCTGGATTTGAAGCTGATGAAATCCGACCTTGAATGTGTTCTCAAGGACCTTAAAAAGTACAGACAGTATTCA CATCGAAACTGA
Upstream 100 bases:
>100_bases TTCATACTTTCGGGAATACTGATGATTATAGTCCCTCCGTTAGTGGAAATGGCCTTTTCATTTAATGGAGTACTCGATAG TCTAGCAGAAGGTATGTGAT
Downstream 100 bases:
>100_bases TCAATCGTTTATTCTGATACAGAATAAATTGCCGTACTTCTAGCTAATATTCCAATTTTAAAAAAAATAATTTGTAGAAA AACAAAGCGAGTGATGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MDLITIYETNFTIFIGIFVTLAVMGTTTLYDRYESKGGASFDLMKIKLFSNQNQQTAAFGSKSLKQFSDYSKKFSSLILN KSISGQEKSSSMKKKSTSIRSNSNNNSFERVEKILFKAKDAVQNLFVNLRSKTLSLSSALPRRSSKDKEKFVSLSDTQKA DLNFSAADKANTLDKVVESKKDELDFDDDLLTKMSTSDTLTVSSPELKTVEPSLGGMSLDLDASFDTDFKLDENEFAIKV DGLDDEPDENNFKFSGNTEEIKFGDESDNFLASLKKDIIIKKEKTINFMDNMQGENLDLKLMKSDLECVLKDLKKYRQYS HRN
Sequences:
>Translated_323_residues MDLITIYETNFTIFIGIFVTLAVMGTTTLYDRYESKGGASFDLMKIKLFSNQNQQTAAFGSKSLKQFSDYSKKFSSLILN KSISGQEKSSSMKKKSTSIRSNSNNNSFERVEKILFKAKDAVQNLFVNLRSKTLSLSSALPRRSSKDKEKFVSLSDTQKA DLNFSAADKANTLDKVVESKKDELDFDDDLLTKMSTSDTLTVSSPELKTVEPSLGGMSLDLDASFDTDFKLDENEFAIKV DGLDDEPDENNFKFSGNTEEIKFGDESDNFLASLKKDIIIKKEKTINFMDNMQGENLDLKLMKSDLECVLKDLKKYRQYS HRN >Mature_323_residues MDLITIYETNFTIFIGIFVTLAVMGTTTLYDRYESKGGASFDLMKIKLFSNQNQQTAAFGSKSLKQFSDYSKKFSSLILN KSISGQEKSSSMKKKSTSIRSNSNNNSFERVEKILFKAKDAVQNLFVNLRSKTLSLSSALPRRSSKDKEKFVSLSDTQKA DLNFSAADKANTLDKVVESKKDELDFDDDLLTKMSTSDTLTVSSPELKTVEPSLGGMSLDLDASFDTDFKLDENEFAIKV DGLDDEPDENNFKFSGNTEEIKFGDESDNFLASLKKDIIIKKEKTINFMDNMQGENLDLKLMKSDLECVLKDLKKYRQYS HRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36468; Mature: 36468
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLITIYETNFTIFIGIFVTLAVMGTTTLYDRYESKGGASFDLMKIKLFSNQNQQTAAFG CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHH SKSLKQFSDYSKKFSSLILNKSISGQEKSSSMKKKSTSIRSNSNNNSFERVEKILFKAKD HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH AVQNLFVNLRSKTLSLSSALPRRSSKDKEKFVSLSDTQKADLNFSAADKANTLDKVVESK HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCC KDELDFDDDLLTKMSTSDTLTVSSPELKTVEPSLGGMSLDLDASFDTDFKLDENEFAIKV CCCCCCCHHHHHHCCCCCEEEECCCCCEEECCCCCCEEEEECCCCCCCCEECCCCEEEEE DGLDDEPDENNFKFSGNTEEIKFGDESDNFLASLKKDIIIKKEKTINFMDNMQGENLDLK CCCCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHEEECCCCHHHHHCCCCCCCCHH LMKSDLECVLKDLKKYRQYSHRN HHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDLITIYETNFTIFIGIFVTLAVMGTTTLYDRYESKGGASFDLMKIKLFSNQNQQTAAFG CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHH SKSLKQFSDYSKKFSSLILNKSISGQEKSSSMKKKSTSIRSNSNNNSFERVEKILFKAKD HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH AVQNLFVNLRSKTLSLSSALPRRSSKDKEKFVSLSDTQKADLNFSAADKANTLDKVVESK HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCC KDELDFDDDLLTKMSTSDTLTVSSPELKTVEPSLGGMSLDLDASFDTDFKLDENEFAIKV CCCCCCCHHHHHHCCCCCEEEECCCCCEEECCCCCCEEEEECCCCCCCCEECCCCEEEEE DGLDDEPDENNFKFSGNTEEIKFGDESDNFLASLKKDIIIKKEKTINFMDNMQGENLDLK CCCCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHEEECCCCHHHHHCCCCCCCCHH LMKSDLECVLKDLKKYRQYSHRN HHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA