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The map label for this gene is flaJ [H]

Identifier: 21226418

GI number: 21226418

Start: 422697

End: 424322

Strand: Reverse

Name: flaJ [H]

Synonym: MM_0316

Alternate gene names: 21226418

Gene position: 424322-422697 (Counterclockwise)

Preceding gene: 21226419

Following gene: 21226417

Centisome position: 10.36

GC content: 40.84

Gene sequence:

>1626_bases
ATGGGTGTCAATAAGATAAAAAACATTTTTAGCAAAAAGTCTAATTCAGGATCCATTTTAGACCAGCTTTATGTTAAATA
TCAAGACTACCAGAAAGAACTCTATATGAGCAATGATATGCTTTTTGCTCTTACTTATATGGCTTCAATCTCGACTGCCA
ATCTTACAAGGGACAAAATATTCTCAAGCATATCTGGAAAGAAAGAGTACTGCCCAAGCAAATATTTTAACCTGATTAAA
GAGCTGGCTCAGCACTGGCATTATGATTACGCCAATGCCTGTGAGCTTATATCCACAAAAGTAAAGCATGACAGGATGAG
GGAACTTCTCAACAGGCTGTCAAACGCCATAGCGGCAGGAGAACCTGATAGTGAATTTCTCACCAAGGAATGGAGACTAT
TCAAGACAAAAAGAAAAGATGAGTTCGAAAGAGACCTTGATACCACGAAAGAATGGTCAAACGCATACACAGCATTGCTT
GTCTCCACATCGCTTGTAGCTATAATTATACTGCTTTCAGTGATTTTATACAATATCGGGGATCCGGCTGATACGCTTTA
TTCCACAATGTTTATCATATTTTTTATGGCCTTCTTTGGAGTAGGCCTGCTTTTTAGATGTTCTCCAAAAGACACTAAAG
TCCATAATTTAAGTGTAAAATCAAAAGAGCAGACTTATATTTATAAGTGGGCTCCTCTTACACTTGTTATCGCAGCCCTG
GCTGTTTTATTGCTAACTGTTCTGCCGGCTTTCACCGGTTCAGCTGCTGATTTCTTTATTGATATTAAAGGAGTCGGGAT
GATTGTTGCAGGAGTTACCATGATTCCTGTAGGGATTGCGGCAAAAAGAGATATTGAAAAAATTAACAAAAGGGATGAAA
GTTATACAACTTTCATAAGAAGCCTCGGGTCTATTATAAGTGGGTCCGGTCTGACTGTTCCAAAAGCTCTTTTAAAGATT
GACCCCAAGAACCTTGGAGAGCTTAAAGATATGAGCCAGGAGCTTTATAAGAAACTGGCATCCGGGCTGGACCCTGCCCT
TTGCTGGGGGAGATTTGTCGGAGAAACGGGCAGTTATTTGATCTACAAATTTACAAGCGTTTTTGTGGACGCTGTCAATT
TCGGAGGTAATGCAGAAGTGGTAGGCGAGCTCGTGAGCTCGTCAAACCTTGAACTTGTCCTTCTGAGAATGAAAAGAGAA
CGCATAGCCAAAGGATTTTCCAGTCTTGTTATTCCTCTCCATGTATCGATGGTTGGCCTTCTTCTTTTCATAGGGCAGAT
CCTTACTATCTTTTCAACCATTATAAATTCCCTTTTTACCCAGTTTGAAATAAACGGTTCCGAACTCGAGGGCATACCCG
GTGGCATGGGTGGCATGAATATGGGCATATTCGGGGGTGTCCCCCTCGAATTGCTGGGGCAATTTGTTGTGATAGTTACT
ATTATTCTAACAATTGCCAACCTACTTGCGATCGTTGCCGTAAAAGGAGGACCGATGTACCTGGCGATCTACTATGGTAT
ATTTATGTTCATACTTTCGGGAATACTGATGATTATAGTCCCTCCGTTAGTGGAAATGGCCTTTTCATTTAATGGAGTAC
TCGATAGTCTAGCAGAAGGTATGTGA

Upstream 100 bases:

>100_bases
GAGCGATGAAGGAATTGTAAACTACTGGGAATTTTTTAACACAATCGCAAAGATTACAAAGTCCGGTATGCTGAGGATTC
AGTTCTAAATGGTGGTTTAG

Downstream 100 bases:

>100_bases
TATGGATTTAATAACTATATACGAAACAAATTTTACAATATTCATAGGTATTTTTGTAACTCTGGCTGTAATGGGGACAA
CAACTCTATACGATAGATAT

Product: flagellar assembly protein J

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 540

Protein sequence:

>541_residues
MGVNKIKNIFSKKSNSGSILDQLYVKYQDYQKELYMSNDMLFALTYMASISTANLTRDKIFSSISGKKEYCPSKYFNLIK
ELAQHWHYDYANACELISTKVKHDRMRELLNRLSNAIAAGEPDSEFLTKEWRLFKTKRKDEFERDLDTTKEWSNAYTALL
VSTSLVAIIILLSVILYNIGDPADTLYSTMFIIFFMAFFGVGLLFRCSPKDTKVHNLSVKSKEQTYIYKWAPLTLVIAAL
AVLLLTVLPAFTGSAADFFIDIKGVGMIVAGVTMIPVGIAAKRDIEKINKRDESYTTFIRSLGSIISGSGLTVPKALLKI
DPKNLGELKDMSQELYKKLASGLDPALCWGRFVGETGSYLIYKFTSVFVDAVNFGGNAEVVGELVSSSNLELVLLRMKRE
RIAKGFSSLVIPLHVSMVGLLLFIGQILTIFSTIINSLFTQFEINGSELEGIPGGMGGMNMGIFGGVPLELLGQFVVIVT
IILTIANLLAIVAVKGGPMYLAIYYGIFMFILSGILMIIVPPLVEMAFSFNGVLDSLAEGM

Sequences:

>Translated_541_residues
MGVNKIKNIFSKKSNSGSILDQLYVKYQDYQKELYMSNDMLFALTYMASISTANLTRDKIFSSISGKKEYCPSKYFNLIK
ELAQHWHYDYANACELISTKVKHDRMRELLNRLSNAIAAGEPDSEFLTKEWRLFKTKRKDEFERDLDTTKEWSNAYTALL
VSTSLVAIIILLSVILYNIGDPADTLYSTMFIIFFMAFFGVGLLFRCSPKDTKVHNLSVKSKEQTYIYKWAPLTLVIAAL
AVLLLTVLPAFTGSAADFFIDIKGVGMIVAGVTMIPVGIAAKRDIEKINKRDESYTTFIRSLGSIISGSGLTVPKALLKI
DPKNLGELKDMSQELYKKLASGLDPALCWGRFVGETGSYLIYKFTSVFVDAVNFGGNAEVVGELVSSSNLELVLLRMKRE
RIAKGFSSLVIPLHVSMVGLLLFIGQILTIFSTIINSLFTQFEINGSELEGIPGGMGGMNMGIFGGVPLELLGQFVVIVT
IILTIANLLAIVAVKGGPMYLAIYYGIFMFILSGILMIIVPPLVEMAFSFNGVLDSLAEGM
>Mature_540_residues
GVNKIKNIFSKKSNSGSILDQLYVKYQDYQKELYMSNDMLFALTYMASISTANLTRDKIFSSISGKKEYCPSKYFNLIKE
LAQHWHYDYANACELISTKVKHDRMRELLNRLSNAIAAGEPDSEFLTKEWRLFKTKRKDEFERDLDTTKEWSNAYTALLV
STSLVAIIILLSVILYNIGDPADTLYSTMFIIFFMAFFGVGLLFRCSPKDTKVHNLSVKSKEQTYIYKWAPLTLVIAALA
VLLLTVLPAFTGSAADFFIDIKGVGMIVAGVTMIPVGIAAKRDIEKINKRDESYTTFIRSLGSIISGSGLTVPKALLKID
PKNLGELKDMSQELYKKLASGLDPALCWGRFVGETGSYLIYKFTSVFVDAVNFGGNAEVVGELVSSSNLELVLLRMKRER
IAKGFSSLVIPLHVSMVGLLLFIGQILTIFSTIINSLFTQFEINGSELEGIPGGMGGMNMGIFGGVPLELLGQFVVIVTI
ILTIANLLAIVAVKGGPMYLAIYYGIFMFILSGILMIIVPPLVEMAFSFNGVLDSLAEGM

Specific function: Unknown

COG id: COG1955

COG function: function code NU; Archaeal flagella assembly protein J

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Archaeal flagellum (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1286 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018076 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 59880; Mature: 59749

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVNKIKNIFSKKSNSGSILDQLYVKYQDYQKELYMSNDMLFALTYMASISTANLTRDKI
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
FSSISGKKEYCPSKYFNLIKELAQHWHYDYANACELISTKVKHDRMRELLNRLSNAIAAG
HHHHCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EPDSEFLTKEWRLFKTKRKDEFERDLDTTKEWSNAYTALLVSTSLVAIIILLSVILYNIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPADTLYSTMFIIFFMAFFGVGLLFRCSPKDTKVHNLSVKSKEQTYIYKWAPLTLVIAAL
CHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEECEECCCCCEEEEEECHHHHHHHHH
AVLLLTVLPAFTGSAADFFIDIKGVGMIVAGVTMIPVGIAAKRDIEKINKRDESYTTFIR
HHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHH
SLGSIISGSGLTVPKALLKIDPKNLGELKDMSQELYKKLASGLDPALCWGRFVGETGSYL
HHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCH
IYKFTSVFVDAVNFGGNAEVVGELVSSSNLELVLLRMKRERIAKGFSSLVIPLHVSMVGL
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFIGQILTIFSTIINSLFTQFEINGSELEGIPGGMGGMNMGIFGGVPLELLGQFVVIVT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
IILTIANLLAIVAVKGGPMYLAIYYGIFMFILSGILMIIVPPLVEMAFSFNGVLDSLAEG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
M
C
>Mature Secondary Structure 
GVNKIKNIFSKKSNSGSILDQLYVKYQDYQKELYMSNDMLFALTYMASISTANLTRDKI
CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
FSSISGKKEYCPSKYFNLIKELAQHWHYDYANACELISTKVKHDRMRELLNRLSNAIAAG
HHHHCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EPDSEFLTKEWRLFKTKRKDEFERDLDTTKEWSNAYTALLVSTSLVAIIILLSVILYNIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPADTLYSTMFIIFFMAFFGVGLLFRCSPKDTKVHNLSVKSKEQTYIYKWAPLTLVIAAL
CHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEECEECCCCCEEEEEECHHHHHHHHH
AVLLLTVLPAFTGSAADFFIDIKGVGMIVAGVTMIPVGIAAKRDIEKINKRDESYTTFIR
HHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHH
SLGSIISGSGLTVPKALLKIDPKNLGELKDMSQELYKKLASGLDPALCWGRFVGETGSYL
HHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCH
IYKFTSVFVDAVNFGGNAEVVGELVSSSNLELVLLRMKRERIAKGFSSLVIPLHVSMVGL
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFIGQILTIFSTIINSLFTQFEINGSELEGIPGGMGGMNMGIFGGVPLELLGQFVVIVT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
IILTIANLLAIVAVKGGPMYLAIYYGIFMFILSGILMIIVPPLVEMAFSFNGVLDSLAEG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
M
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]