Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226412
Identifier: 21226412
GI number: 21226412
Start: 413671
End: 414480
Strand: Reverse
Name: 21226412
Synonym: MM_0310
Alternate gene names: NA
Gene position: 414480-413671 (Counterclockwise)
Preceding gene: 21226417
Following gene: 21226408
Centisome position: 10.12
GC content: 39.26
Gene sequence:
>810_bases GTGATTAAATTCCCTGATGAAATCCCTGACTCCTGTAAATGGCAAAAAGTCGAGCCCATTAACAGGGGGTGGTCAGATGA TCAGAAATATTATGTCCGAACTACAGACGGCAGAGAACTATTACTCCGAGTATCGGACGTCTCGCAATACGAGAACAGAA AACGGGACTTTGAAGCAATAAAACAGCTTGATAAGCTTGATATTTTGATATCGCATCCGGTTGATTTTGGAATTTGTAAT AACGGAAAATCAGTGTACTCTTTGCTAACCTGGATTAAAGGTAAGGATGCAGAATATCTTCTTCCGAGACTTGACAGAAA AGAGCAATACCAGTTTGGAGTTAAAGCGGGTGAAATCTTAAAAATAATACATCAAGTATCTACGGCAAAAAATCAAATCT CATGGTCGGAGCGGTTTAATCGGAAAATAAACAGAAATATTGCCGCTTATGAAGCTTGCGGGATTCGTCTGAAGGGAGCA GAGAAGATAATTGAATACATAGAACAGAACCGGTATTTGCTGGATAATCGGCCTCAGTGTTTTCAACATGGTGACTATCA TGCCGGAAATATGATTATTACAGAGTCTGGAGAGCTGGGAATTATTGATTTTAACAGAGTTGATTATGGTGACCCCTGGG AAGAATTCAACCGTATTACATGGTGTGCGGATATAAGTGCCTCATTTGCTTCAGGACGCATAAATGGATATTTTGAACAC GATGTACCTGCTTTATTTTTCAGATTAATGGCTTTATATATTGCAAGTAACCAGCTTTCATCAATTCCCTGGGCAATTCA ATTTGGATAG
Upstream 100 bases:
>100_bases GTATCCGGAATGATAAATGATTATTTATAAAAGAAAACTCTAAAGTTTTAACCTTAATAAACGGCAATCTACAGGTTACA ATATTCATAGAGCTGTTAAC
Downstream 100 bases:
>100_bases AAAGAAGTCAACACAATGCTCAGGCAAGCCGAAACCGTTTTGAAATGGTATGATGGATTTGAAACATTCATACCAGAATG GTATAGTTCAAAAAATAACA
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphotransferase Family Protein; Aminoglycoside Phosphotransferase Domain Protein; Kanamycin Kinase
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MIKFPDEIPDSCKWQKVEPINRGWSDDQKYYVRTTDGRELLLRVSDVSQYENRKRDFEAIKQLDKLDILISHPVDFGICN NGKSVYSLLTWIKGKDAEYLLPRLDRKEQYQFGVKAGEILKIIHQVSTAKNQISWSERFNRKINRNIAAYEACGIRLKGA EKIIEYIEQNRYLLDNRPQCFQHGDYHAGNMIITESGELGIIDFNRVDYGDPWEEFNRITWCADISASFASGRINGYFEH DVPALFFRLMALYIASNQLSSIPWAIQFG
Sequences:
>Translated_269_residues MIKFPDEIPDSCKWQKVEPINRGWSDDQKYYVRTTDGRELLLRVSDVSQYENRKRDFEAIKQLDKLDILISHPVDFGICN NGKSVYSLLTWIKGKDAEYLLPRLDRKEQYQFGVKAGEILKIIHQVSTAKNQISWSERFNRKINRNIAAYEACGIRLKGA EKIIEYIEQNRYLLDNRPQCFQHGDYHAGNMIITESGELGIIDFNRVDYGDPWEEFNRITWCADISASFASGRINGYFEH DVPALFFRLMALYIASNQLSSIPWAIQFG >Mature_269_residues MIKFPDEIPDSCKWQKVEPINRGWSDDQKYYVRTTDGRELLLRVSDVSQYENRKRDFEAIKQLDKLDILISHPVDFGICN NGKSVYSLLTWIKGKDAEYLLPRLDRKEQYQFGVKAGEILKIIHQVSTAKNQISWSERFNRKINRNIAAYEACGIRLKGA EKIIEYIEQNRYLLDNRPQCFQHGDYHAGNMIITESGELGIIDFNRVDYGDPWEEFNRITWCADISASFASGRINGYFEH DVPALFFRLMALYIASNQLSSIPWAIQFG
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31321; Mature: 31321
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKFPDEIPDSCKWQKVEPINRGWSDDQKYYVRTTDGRELLLRVSDVSQYENRKRDFEAI CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHH KQLDKLDILISHPVDFGICNNGKSVYSLLTWIKGKDAEYLLPRLDRKEQYQFGVKAGEIL HHHHHHHEEEECCCCEEEECCCHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHCCCHHHHH KIIHQVSTAKNQISWSERFNRKINRNIAAYEACGIRLKGAEKIIEYIEQNRYLLDNRPQC HHHHHHHHHHHHCHHHHHHHHHHHCCHHEEHHCCEEECCHHHHHHHHHCCCEECCCCCHH FQHGDYHAGNMIITESGELGIIDFNRVDYGDPWEEFNRITWCADISASFASGRINGYFEH HHCCCCCCCCEEEECCCCEEEEECCCCCCCCCHHHHCCEEEEECCCCHHCCCCCCCEECC DVPALFFRLMALYIASNQLSSIPWAIQFG CHHHHHHHHHHHHHHHCCCCCCCEEEECC >Mature Secondary Structure MIKFPDEIPDSCKWQKVEPINRGWSDDQKYYVRTTDGRELLLRVSDVSQYENRKRDFEAI CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHH KQLDKLDILISHPVDFGICNNGKSVYSLLTWIKGKDAEYLLPRLDRKEQYQFGVKAGEIL HHHHHHHEEEECCCCEEEECCCHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHCCCHHHHH KIIHQVSTAKNQISWSERFNRKINRNIAAYEACGIRLKGAEKIIEYIEQNRYLLDNRPQC HHHHHHHHHHHHCHHHHHHHHHHHCCHHEEHHCCEEECCHHHHHHHHHCCCEECCCCCHH FQHGDYHAGNMIITESGELGIIDFNRVDYGDPWEEFNRITWCADISASFASGRINGYFEH HHCCCCCCCCEEEECCCCEEEEECCCCCCCCCHHHHCCEEEEECCCCHHCCCCCCCEECC DVPALFFRLMALYIASNQLSSIPWAIQFG CHHHHHHHHHHHHHHHCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA