Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226412

Identifier: 21226412

GI number: 21226412

Start: 413671

End: 414480

Strand: Reverse

Name: 21226412

Synonym: MM_0310

Alternate gene names: NA

Gene position: 414480-413671 (Counterclockwise)

Preceding gene: 21226417

Following gene: 21226408

Centisome position: 10.12

GC content: 39.26

Gene sequence:

>810_bases
GTGATTAAATTCCCTGATGAAATCCCTGACTCCTGTAAATGGCAAAAAGTCGAGCCCATTAACAGGGGGTGGTCAGATGA
TCAGAAATATTATGTCCGAACTACAGACGGCAGAGAACTATTACTCCGAGTATCGGACGTCTCGCAATACGAGAACAGAA
AACGGGACTTTGAAGCAATAAAACAGCTTGATAAGCTTGATATTTTGATATCGCATCCGGTTGATTTTGGAATTTGTAAT
AACGGAAAATCAGTGTACTCTTTGCTAACCTGGATTAAAGGTAAGGATGCAGAATATCTTCTTCCGAGACTTGACAGAAA
AGAGCAATACCAGTTTGGAGTTAAAGCGGGTGAAATCTTAAAAATAATACATCAAGTATCTACGGCAAAAAATCAAATCT
CATGGTCGGAGCGGTTTAATCGGAAAATAAACAGAAATATTGCCGCTTATGAAGCTTGCGGGATTCGTCTGAAGGGAGCA
GAGAAGATAATTGAATACATAGAACAGAACCGGTATTTGCTGGATAATCGGCCTCAGTGTTTTCAACATGGTGACTATCA
TGCCGGAAATATGATTATTACAGAGTCTGGAGAGCTGGGAATTATTGATTTTAACAGAGTTGATTATGGTGACCCCTGGG
AAGAATTCAACCGTATTACATGGTGTGCGGATATAAGTGCCTCATTTGCTTCAGGACGCATAAATGGATATTTTGAACAC
GATGTACCTGCTTTATTTTTCAGATTAATGGCTTTATATATTGCAAGTAACCAGCTTTCATCAATTCCCTGGGCAATTCA
ATTTGGATAG

Upstream 100 bases:

>100_bases
GTATCCGGAATGATAAATGATTATTTATAAAAGAAAACTCTAAAGTTTTAACCTTAATAAACGGCAATCTACAGGTTACA
ATATTCATAGAGCTGTTAAC

Downstream 100 bases:

>100_bases
AAAGAAGTCAACACAATGCTCAGGCAAGCCGAAACCGTTTTGAAATGGTATGATGGATTTGAAACATTCATACCAGAATG
GTATAGTTCAAAAAATAACA

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphotransferase Family Protein; Aminoglycoside Phosphotransferase Domain Protein; Kanamycin Kinase

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MIKFPDEIPDSCKWQKVEPINRGWSDDQKYYVRTTDGRELLLRVSDVSQYENRKRDFEAIKQLDKLDILISHPVDFGICN
NGKSVYSLLTWIKGKDAEYLLPRLDRKEQYQFGVKAGEILKIIHQVSTAKNQISWSERFNRKINRNIAAYEACGIRLKGA
EKIIEYIEQNRYLLDNRPQCFQHGDYHAGNMIITESGELGIIDFNRVDYGDPWEEFNRITWCADISASFASGRINGYFEH
DVPALFFRLMALYIASNQLSSIPWAIQFG

Sequences:

>Translated_269_residues
MIKFPDEIPDSCKWQKVEPINRGWSDDQKYYVRTTDGRELLLRVSDVSQYENRKRDFEAIKQLDKLDILISHPVDFGICN
NGKSVYSLLTWIKGKDAEYLLPRLDRKEQYQFGVKAGEILKIIHQVSTAKNQISWSERFNRKINRNIAAYEACGIRLKGA
EKIIEYIEQNRYLLDNRPQCFQHGDYHAGNMIITESGELGIIDFNRVDYGDPWEEFNRITWCADISASFASGRINGYFEH
DVPALFFRLMALYIASNQLSSIPWAIQFG
>Mature_269_residues
MIKFPDEIPDSCKWQKVEPINRGWSDDQKYYVRTTDGRELLLRVSDVSQYENRKRDFEAIKQLDKLDILISHPVDFGICN
NGKSVYSLLTWIKGKDAEYLLPRLDRKEQYQFGVKAGEILKIIHQVSTAKNQISWSERFNRKINRNIAAYEACGIRLKGA
EKIIEYIEQNRYLLDNRPQCFQHGDYHAGNMIITESGELGIIDFNRVDYGDPWEEFNRITWCADISASFASGRINGYFEH
DVPALFFRLMALYIASNQLSSIPWAIQFG

Specific function: Unknown

COG id: COG3173

COG function: function code R; Predicted aminoglycoside phosphotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31321; Mature: 31321

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKFPDEIPDSCKWQKVEPINRGWSDDQKYYVRTTDGRELLLRVSDVSQYENRKRDFEAI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHH
KQLDKLDILISHPVDFGICNNGKSVYSLLTWIKGKDAEYLLPRLDRKEQYQFGVKAGEIL
HHHHHHHEEEECCCCEEEECCCHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHCCCHHHHH
KIIHQVSTAKNQISWSERFNRKINRNIAAYEACGIRLKGAEKIIEYIEQNRYLLDNRPQC
HHHHHHHHHHHHCHHHHHHHHHHHCCHHEEHHCCEEECCHHHHHHHHHCCCEECCCCCHH
FQHGDYHAGNMIITESGELGIIDFNRVDYGDPWEEFNRITWCADISASFASGRINGYFEH
HHCCCCCCCCEEEECCCCEEEEECCCCCCCCCHHHHCCEEEEECCCCHHCCCCCCCEECC
DVPALFFRLMALYIASNQLSSIPWAIQFG
CHHHHHHHHHHHHHHHCCCCCCCEEEECC
>Mature Secondary Structure
MIKFPDEIPDSCKWQKVEPINRGWSDDQKYYVRTTDGRELLLRVSDVSQYENRKRDFEAI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHH
KQLDKLDILISHPVDFGICNNGKSVYSLLTWIKGKDAEYLLPRLDRKEQYQFGVKAGEIL
HHHHHHHEEEECCCCEEEECCCHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHCCCHHHHH
KIIHQVSTAKNQISWSERFNRKINRNIAAYEACGIRLKGAEKIIEYIEQNRYLLDNRPQC
HHHHHHHHHHHHCHHHHHHHHHHHCCHHEEHHCCEEECCHHHHHHHHHCCCEECCCCCHH
FQHGDYHAGNMIITESGELGIIDFNRVDYGDPWEEFNRITWCADISASFASGRINGYFEH
HHCCCCCCCCEEEECCCCEEEEECCCCCCCCCHHHHCCEEEEECCCCHHCCCCCCCEECC
DVPALFFRLMALYIASNQLSSIPWAIQFG
CHHHHHHHHHHHHHHHCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA