Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226390

Identifier: 21226390

GI number: 21226390

Start: 388062

End: 388583

Strand: Direct

Name: 21226390

Synonym: MM_0288

Alternate gene names: NA

Gene position: 388062-388583 (Clockwise)

Preceding gene: 21226389

Following gene: 21226391

Centisome position: 9.47

GC content: 42.15

Gene sequence:

>522_bases
ATGGGTAAACGAACTCGAATAATTAACGATCCTTCCTATTTAGTACCATTACTCAGGACTTTTGGATCCAGAACCCATAA
AAAAATATTCGACGCACTTTCTAACAAATGGATGACCAGAGCGGAAATCGATGAGTTTATAGGCACAGACTCATCAAAAA
GCCTTCATATTCTGAAAAAAGCCGGGCTCCTTGAAAGCCAGTGGAGAGTTCCCGAAGCAGGGCAAAAACCCTCGAAAGAA
TACCACAGTTCTTATTCAAAGGTCCAGGTGAACTTCCAGTGTTCTTTTGAAGACCTCAGCGACATTATTATGCTGACCTT
CAAGCCTTATGAAGAGGTTAAGGACGCTATGGAGGAACTTGAAAGACTGGTAGAAGAAGGCAATACCTCGATGAGCAACC
TCACAAGGACTCTTAATAGGAATCCGTTCTATATCTGTGCTGTTGCCCGCAGGTCCGAAAGGCTTTCAGTAATGGGGCAG
AGATTAAAATTAATTGAAGATGTAGAGGAGAATTACGATTGA

Upstream 100 bases:

>100_bases
CGGGCCCGAAGGGCTTGAGATTGCTTATAACGAATAATTACATTACAAATCTTTATTATATTTGAAACTGATAAGATAAG
GCGAGAAGGAGAGGACATAA

Downstream 100 bases:

>100_bases
TGATTAAAATCCTCCAGACCAAGAGCGGAGTCACCAAATTTCAGGTCCTCATTGAGATTGCAGCCCACCAGCCCAATGTA
AGGCAGAAAGAAATTGCCGC

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator ArsR Family

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MGKRTRIINDPSYLVPLLRTFGSRTHKKIFDALSNKWMTRAEIDEFIGTDSSKSLHILKKAGLLESQWRVPEAGQKPSKE
YHSSYSKVQVNFQCSFEDLSDIIMLTFKPYEEVKDAMEELERLVEEGNTSMSNLTRTLNRNPFYICAVARRSERLSVMGQ
RLKLIEDVEENYD

Sequences:

>Translated_173_residues
MGKRTRIINDPSYLVPLLRTFGSRTHKKIFDALSNKWMTRAEIDEFIGTDSSKSLHILKKAGLLESQWRVPEAGQKPSKE
YHSSYSKVQVNFQCSFEDLSDIIMLTFKPYEEVKDAMEELERLVEEGNTSMSNLTRTLNRNPFYICAVARRSERLSVMGQ
RLKLIEDVEENYD
>Mature_172_residues
GKRTRIINDPSYLVPLLRTFGSRTHKKIFDALSNKWMTRAEIDEFIGTDSSKSLHILKKAGLLESQWRVPEAGQKPSKEY
HSSYSKVQVNFQCSFEDLSDIIMLTFKPYEEVKDAMEELERLVEEGNTSMSNLTRTLNRNPFYICAVARRSERLSVMGQR
LKLIEDVEENYD

Specific function: Unknown

COG id: COG4860

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20103; Mature: 19972

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKRTRIINDPSYLVPLLRTFGSRTHKKIFDALSNKWMTRAEIDEFIGTDSSKSLHILKK
CCCCCCEECCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHH
AGLLESQWRVPEAGQKPSKEYHSSYSKVQVNFQCSFEDLSDIIMLTFKPYEEVKDAMEEL
CCCCHHHCCCCCCCCCCCHHHHCCHHEEEEEEEECHHHHHHHHHEECCCHHHHHHHHHHH
ERLVEEGNTSMSNLTRTLNRNPFYICAVARRSERLSVMGQRLKLIEDVEENYD
HHHHHCCCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GKRTRIINDPSYLVPLLRTFGSRTHKKIFDALSNKWMTRAEIDEFIGTDSSKSLHILKK
CCCCCEECCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHH
AGLLESQWRVPEAGQKPSKEYHSSYSKVQVNFQCSFEDLSDIIMLTFKPYEEVKDAMEEL
CCCCHHHCCCCCCCCCCCHHHHCCHHEEEEEEEECHHHHHHHHHEECCCHHHHHHHHHHH
ERLVEEGNTSMSNLTRTLNRNPFYICAVARRSERLSVMGQRLKLIEDVEENYD
HHHHHCCCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA