Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is dys2 [H]
Identifier: 21226389
GI number: 21226389
Start: 386949
End: 387998
Strand: Direct
Name: dys2 [H]
Synonym: MM_0287
Alternate gene names: 21226389
Gene position: 386949-387998 (Clockwise)
Preceding gene: 21226388
Following gene: 21226390
Centisome position: 9.45
GC content: 48.57
Gene sequence:
>1050_bases ATGGAGAATGGTATGCATCACAATGTATTTACTAACACCCCGACAATTCCGATTGATGTAAAGGACAGGTCTGTAAGCGA ATTAATGGACGGAATGCTCAGGACAGGTTTTCAGGGCAGAAAGCTTGCGGAATCGGTTCAGGCATGGAGCAACATGCTCA AAGAAAAGGACACTACCGTACTCATGGGCCTGTCCGGAGCCATGGTTCCTGCCGGCATGCGCAGGGTTATTTCTTACCTT ATCCGGGAAAGAATGATCGACTGCCTTGTAAGCACAGGAGCAAACCTCTTCCATGATTCTCACGAAGCCCTCGGGAGAAA ACATTATGTGGGCTCTCATCTTGCCAATGATGAAAAACTCTTTGAACACGGTGTGGACAGGATTTATGACGTCTTTGCAG TTGAAGAAGAGTTCAGGAACGCAGACAACCTGATTGCGGATTTTGCAGAGGAAATCGGAGAGATAAGCTGTTCTTCAAGA GAGTTTATGTACCTTCTTGGGAAGGAGCTCGTAAGGAGAGGAGCTGCCGAGGATTCGATAGTAGTAAGTGCATACAGGCA TAACGTCCCCATATTCGTGCCCGCCCTATCGGACAGTTCCATAGGTATAGGGCTTACCATTGCAAGGAGAAGAGGGCTCA AACTTGAAATAGACCAGATAAAAGACGTTGACGAAATCACACAGATCGTTGAAAAGTCAGGGCATACGGGTGTGGTCTAT GTAGGAGGAGGAGTCCCGAAGAATTTTATCCAGCAGACCGAAGTGATAGCTTCTATTCTGGGAATGGACGTTCCGGGGCA TGAATATGCTATCCAGTATACCTCGGACTCTCCTCACTGGGGTGGGCTCTCAGGCTGCACTTTTGACGAAGCGGTTTCCT GGGGCAAGGTTGCAGCTCAGGCAAAAAAAGTGCAGGTTTTCGTGGATGCCACCATTGCCCTTCCTATTGTTGCCCATGCT TTGCATGAAAAGACGCGCGGAGTTAAACGCACTGCCCCTGTCTTTTCCTGGGACGGGCCCGAAGGGCTTGAGATTGCTTA TAACGAATAA
Upstream 100 bases:
>100_bases TCCCTTAACGCTGTTTGCGCCTCTTACCGTATATTGCCAGGTACCTGCGGGAAGGCAGTAAGGGCTACAGGCAAAACATA TCGCAATCTGTTATATTTAT
Downstream 100 bases:
>100_bases TTACATTACAAATCTTTATTATATTTGAAACTGATAAGATAAGGCGAGAAGGAGAGGACATAAATGGGTAAACGAACTCG AATAATTAACGATCCTTCCT
Product: putative deoxyhypusine synthase
Products: NA
Alternate protein names: DHS 2 [H]
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MENGMHHNVFTNTPTIPIDVKDRSVSELMDGMLRTGFQGRKLAESVQAWSNMLKEKDTTVLMGLSGAMVPAGMRRVISYL IRERMIDCLVSTGANLFHDSHEALGRKHYVGSHLANDEKLFEHGVDRIYDVFAVEEEFRNADNLIADFAEEIGEISCSSR EFMYLLGKELVRRGAAEDSIVVSAYRHNVPIFVPALSDSSIGIGLTIARRRGLKLEIDQIKDVDEITQIVEKSGHTGVVY VGGGVPKNFIQQTEVIASILGMDVPGHEYAIQYTSDSPHWGGLSGCTFDEAVSWGKVAAQAKKVQVFVDATIALPIVAHA LHEKTRGVKRTAPVFSWDGPEGLEIAYNE
Sequences:
>Translated_349_residues MENGMHHNVFTNTPTIPIDVKDRSVSELMDGMLRTGFQGRKLAESVQAWSNMLKEKDTTVLMGLSGAMVPAGMRRVISYL IRERMIDCLVSTGANLFHDSHEALGRKHYVGSHLANDEKLFEHGVDRIYDVFAVEEEFRNADNLIADFAEEIGEISCSSR EFMYLLGKELVRRGAAEDSIVVSAYRHNVPIFVPALSDSSIGIGLTIARRRGLKLEIDQIKDVDEITQIVEKSGHTGVVY VGGGVPKNFIQQTEVIASILGMDVPGHEYAIQYTSDSPHWGGLSGCTFDEAVSWGKVAAQAKKVQVFVDATIALPIVAHA LHEKTRGVKRTAPVFSWDGPEGLEIAYNE >Mature_349_residues MENGMHHNVFTNTPTIPIDVKDRSVSELMDGMLRTGFQGRKLAESVQAWSNMLKEKDTTVLMGLSGAMVPAGMRRVISYL IRERMIDCLVSTGANLFHDSHEALGRKHYVGSHLANDEKLFEHGVDRIYDVFAVEEEFRNADNLIADFAEEIGEISCSSR EFMYLLGKELVRRGAAEDSIVVSAYRHNVPIFVPALSDSSIGIGLTIARRRGLKLEIDQIKDVDEITQIVEKSGHTGVVY VGGGVPKNFIQQTEVIASILGMDVPGHEYAIQYTSDSPHWGGLSGCTFDEAVSWGKVAAQAKKVQVFVDATIALPIVAHA LHEKTRGVKRTAPVFSWDGPEGLEIAYNE
Specific function: Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine
COG id: COG1899
COG function: function code O; Deoxyhypusine synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the deoxyhypusine synthase family [H]
Homologues:
Organism=Homo sapiens, GI4503325, Length=326, Percent_Identity=25.4601226993865, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI7108338, Length=227, Percent_Identity=23.7885462555066, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI7108340, Length=228, Percent_Identity=24.1228070175439, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17536927, Length=336, Percent_Identity=26.7857142857143, Blast_Score=128, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6321859, Length=351, Percent_Identity=23.0769230769231, Blast_Score=107, Evalue=2e-24, Organism=Drosophila melanogaster, GI45550569, Length=320, Percent_Identity=25.625, Blast_Score=118, Evalue=6e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002773 - InterPro: IPR022899 [H]
Pfam domain/function: PF01916 DS [H]
EC number: =2.5.1.46 [H]
Molecular weight: Translated: 38474; Mature: 38474
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENGMHHNVFTNTPTIPIDVKDRSVSELMDGMLRTGFQGRKLAESVQAWSNMLKEKDTTV CCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEE LMGLSGAMVPAGMRRVISYLIRERMIDCLVSTGANLFHDSHEALGRKHYVGSHLANDEKL EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHCHHHHHHHHCCCHHHH FEHGVDRIYDVFAVEEEFRNADNLIADFAEEIGEISCSSREFMYLLGKELVRRGAAEDSI HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCE VVSAYRHNVPIFVPALSDSSIGIGLTIARRRGLKLEIDQIKDVDEITQIVEKSGHTGVVY EEEEECCCCCEEEEECCCCCCCEEEEEECCCCCEEEHHHHCCHHHHHHHHHCCCCCEEEE VGGGVPKNFIQQTEVIASILGMDVPGHEYAIQYTSDSPHWGGLSGCTFDEAVSWGKVAAQ ECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH AKKVQVFVDATIALPIVAHALHEKTRGVKRTAPVFSWDGPEGLEIAYNE HHEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEECC >Mature Secondary Structure MENGMHHNVFTNTPTIPIDVKDRSVSELMDGMLRTGFQGRKLAESVQAWSNMLKEKDTTV CCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEE LMGLSGAMVPAGMRRVISYLIRERMIDCLVSTGANLFHDSHEALGRKHYVGSHLANDEKL EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHCHHHHHHHHCCCHHHH FEHGVDRIYDVFAVEEEFRNADNLIADFAEEIGEISCSSREFMYLLGKELVRRGAAEDSI HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCE VVSAYRHNVPIFVPALSDSSIGIGLTIARRRGLKLEIDQIKDVDEITQIVEKSGHTGVVY EEEEECCCCCEEEEECCCCCCCEEEEEECCCCCEEEHHHHCCHHHHHHHHHCCCCCEEEE VGGGVPKNFIQQTEVIASILGMDVPGHEYAIQYTSDSPHWGGLSGCTFDEAVSWGKVAAQ ECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH AKKVQVFVDATIALPIVAHALHEKTRGVKRTAPVFSWDGPEGLEIAYNE HHEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]