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The map label for this gene is pdaD1

Identifier: 21226388

GI number: 21226388

Start: 386031

End: 386528

Strand: Direct

Name: pdaD1

Synonym: MM_0286

Alternate gene names: 21226388

Gene position: 386031-386528 (Clockwise)

Preceding gene: 21226385

Following gene: 21226389

Centisome position: 9.42

GC content: 42.97

Gene sequence:

>498_bases
ATGATTACAAAGTTAATTCCAAAAAAAGTGTTCTTTACAAGTGGTGCCGGTACACATCCCGAAAAACTTGAATCATTTGA
GGCTGCCCTTCGGGACGCATGTATTGAAAAATTTAACCTTGTAACTGTGAGTTCTATCCTGCCTCCGAGATGTGAAATTG
TAACAAAGGAGGAAGGTCTGAAAGAACTCAGCCCCGGAGAGATAGTTTTCTGTGTAATGTCCAGAATCTCTTCGAATGAT
CCCGGAAAAACGTTAACAAGTTCAGTGGGCTGTGCTCTTCCAGTGGATATCAGCAAACATGGTTATATCTCCGAATACCA
CGCTTATGAAGAAAGCGCGCAGGACGCAGGTGCACACGCAGTAAAACTTGCAGAAAGCATGTACAGCACCTGGACAAAAG
AAGAGCCTCTTAAAACATTCAGCATCCCCAGATCGTCAACAGTAAAAGATAGCGGCGACTGGATGACTGTAATATCCGCA
GCAGTTTTTGTTATTTAA

Upstream 100 bases:

>100_bases
AGAAAAAGAGCTTTTTTCAGCTAAATTGAAGGGCAACGCTTAAAAATGATAATTGCTATCTGGTTTAGGCTTAAACTGAG
GATATTTTAAGGATGCAAAG

Downstream 100 bases:

>100_bases
ATAACAGGATATCCTGTACAAACGGTAATACTGCTATTTCATATACATTATAACAGTACTGGTTACACTGGTTGTTTACA
GTATATTGTTTGTTTGCGAT

Product: pyruvoyl-dependent arginine decarboxylase

Products: NA

Alternate protein names: PvlArgDC 1

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MITKLIPKKVFFTSGAGTHPEKLESFEAALRDACIEKFNLVTVSSILPPRCEIVTKEEGLKELSPGEIVFCVMSRISSND
PGKTLTSSVGCALPVDISKHGYISEYHAYEESAQDAGAHAVKLAESMYSTWTKEEPLKTFSIPRSSTVKDSGDWMTVISA
AVFVI

Sequences:

>Translated_165_residues
MITKLIPKKVFFTSGAGTHPEKLESFEAALRDACIEKFNLVTVSSILPPRCEIVTKEEGLKELSPGEIVFCVMSRISSND
PGKTLTSSVGCALPVDISKHGYISEYHAYEESAQDAGAHAVKLAESMYSTWTKEEPLKTFSIPRSSTVKDSGDWMTVISA
AVFVI
>Mature_165_residues
MITKLIPKKVFFTSGAGTHPEKLESFEAALRDACIEKFNLVTVSSILPPRCEIVTKEEGLKELSPGEIVFCVMSRISSND
PGKTLTSSVGCALPVDISKHGYISEYHAYEESAQDAGAHAVKLAESMYSTWTKEEPLKTFSIPRSSTVKDSGDWMTVISA
AVFVI

Specific function: Unknown

COG id: COG1945

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pdaD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PDAD1_METMA (P58889)

Other databases:

- EMBL:   AE008384
- RefSeq:   NP_632310.1
- ProteinModelPortal:   P58889
- GeneID:   1478628
- GenomeReviews:   AE008384_GR
- KEGG:   mma:MM_0286
- NMPDR:   fig|192952.1.peg.286
- HOGENOM:   HBG539680
- OMA:   ISEYHAY
- ProtClustDB:   PRK12398
- BioCyc:   MMAZ192952:MM0286-MONOMER
- BRENDA:   4.1.1.19
- HAMAP:   MF_01404
- InterPro:   IPR016104
- InterPro:   IPR016105
- InterPro:   IPR002724
- Gene3D:   G3DSA:3.50.20.10
- PIRSF:   PIRSF005216
- ProDom:   PD010449
- TIGRFAMs:   TIGR00286

Pfam domain/function: PF01862 PvlArgDC; SSF56271 His_carbxylase

EC number: =4.1.1.19

Molecular weight: Translated: 17992; Mature: 17992

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITKLIPKKVFFTSGAGTHPEKLESFEAALRDACIEKFNLVTVSSILPPRCEIVTKEEGL
CCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEHHHCCCCCCEEEECHHCC
KELSPGEIVFCVMSRISSNDPGKTLTSSVGCALPVDISKHGYISEYHAYEESAQDAGAHA
CCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHH
VKLAESMYSTWTKEEPLKTFSIPRSSTVKDSGDWMTVISAAVFVI
HHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MITKLIPKKVFFTSGAGTHPEKLESFEAALRDACIEKFNLVTVSSILPPRCEIVTKEEGL
CCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEHHHCCCCCCEEEECHHCC
KELSPGEIVFCVMSRISSNDPGKTLTSSVGCALPVDISKHGYISEYHAYEESAQDAGAHA
CCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHH
VKLAESMYSTWTKEEPLKTFSIPRSSTVKDSGDWMTVISAAVFVI
HHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824