Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226365
Identifier: 21226365
GI number: 21226365
Start: 352470
End: 352892
Strand: Reverse
Name: 21226365
Synonym: MM_0263
Alternate gene names: NA
Gene position: 352892-352470 (Counterclockwise)
Preceding gene: 21226366
Following gene: 21226364
Centisome position: 8.61
GC content: 44.21
Gene sequence:
>423_bases GTGGGGGAAGACATAGTGAAAATTAGAGTAGTTAGTTCAAGGGAAGAAATCTTTACACTAAATCCTAATGAGCGTGTTGT TCACCTGGCCTTCAGGCCTTCGAACAAGGACATTTTTGCACTTGTAGAAACCTGCCCGAAAATTGAGGTAATTCAGCTGC CGAAATCTTACAGGCGCACGGTCTCGAAGTCTATAGAAATGTTCCTTGAAATGCAGAGAATCCAGCTTATCGAAGGGGAT GTCTGGGGCCACAGGAAAGACATTAATGAATATTACAGCATTCCATCATCTGTGATCGAAAAGATCAGAGAACTGAAGAT GGAGGGCACGCCTGCTGAGAGGATAGAAGAAAAGGTTGCAAGGGAAAGCAAGCTTAACCCTGAAATGGTTGCTTATATCC TGACCAAGGAAGCTTCTGCCTGA
Upstream 100 bases:
>100_bases GAAGGTGCAGAAAACTGTTTGAAAATTAGAGGGCGTGGTAGACAAATATTTATAATAAGTATAAGTAGTTAATATTGAGA TAAAAACATAAAACTTTACA
Downstream 100 bases:
>100_bases GAACCCTGAAAATAAGGAATTTTCCAGTAAGGTATTTTTCCTTTCGTTCTTATGTACAACAGGATAATATTGAAAGACTA AACATCTTTCAAATATCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MGEDIVKIRVVSSREEIFTLNPNERVVHLAFRPSNKDIFALVETCPKIEVIQLPKSYRRTVSKSIEMFLEMQRIQLIEGD VWGHRKDINEYYSIPSSVIEKIRELKMEGTPAERIEEKVARESKLNPEMVAYILTKEASA
Sequences:
>Translated_140_residues MGEDIVKIRVVSSREEIFTLNPNERVVHLAFRPSNKDIFALVETCPKIEVIQLPKSYRRTVSKSIEMFLEMQRIQLIEGD VWGHRKDINEYYSIPSSVIEKIRELKMEGTPAERIEEKVARESKLNPEMVAYILTKEASA >Mature_139_residues GEDIVKIRVVSSREEIFTLNPNERVVHLAFRPSNKDIFALVETCPKIEVIQLPKSYRRTVSKSIEMFLEMQRIQLIEGDV WGHRKDINEYYSIPSSVIEKIRELKMEGTPAERIEEKVARESKLNPEMVAYILTKEASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16250; Mature: 16119
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEDIVKIRVVSSREEIFTLNPNERVVHLAFRPSNKDIFALVETCPKIEVIQLPKSYRRT CCCCEEEEEEECCCCEEEEECCCCEEEEEEECCCCCCEEHEEHHCCCEEEEECCHHHHHH VSKSIEMFLEMQRIQLIEGDVWGHRKDINEYYSIPSSVIEKIRELKMEGTPAERIEEKVA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHH RESKLNPEMVAYILTKEASA HHCCCCHHHHHHEECCCCCC >Mature Secondary Structure GEDIVKIRVVSSREEIFTLNPNERVVHLAFRPSNKDIFALVETCPKIEVIQLPKSYRRT CCCEEEEEEECCCCEEEEECCCCEEEEEEECCCCCCEEHEEHHCCCEEEEECCHHHHHH VSKSIEMFLEMQRIQLIEGDVWGHRKDINEYYSIPSSVIEKIRELKMEGTPAERIEEKVA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHH RESKLNPEMVAYILTKEASA HHCCCCHHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA