Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226364
Identifier: 21226364
GI number: 21226364
Start: 350979
End: 351776
Strand: Reverse
Name: 21226364
Synonym: MM_0262
Alternate gene names: NA
Gene position: 351776-350979 (Counterclockwise)
Preceding gene: 21226365
Following gene: 21226361
Centisome position: 8.59
GC content: 42.61
Gene sequence:
>798_bases GTGAAACTGGAACTCATAGAGCTGATTTTTCTTTCCGATAAACGAAAACAACTATTGCTTTTTCTCAGAAGCGGGACCAA AAACATGGATGAAATTACGGAAGCTCTTCAGGTAACTTCCACTTCTATCCTTCCCCAGATTAAGAAATTAAAAGATATGT CCCTGGTCTTACAGGAAGACAGGTCATATACTCTCTCTCCTATCGGAAAAGTTCTCGTTGAAAAAATGCAGCCTCTCGTC AGCACTATAGAGCTTTTTGAAGACAATTTCGAGTACTGGTCGGAAAAGGATCTGCAGGCGTTTACCCTCTCTTTTAAGAA AAGGCTTGGAGAGCTCGGTAAGTGTAAACTGATCCAGCCTGACCTCGACCGCATGTTCGAGCTCGACCCTGAAGTTGTTG AAGGACTTTCAAGCTCCGCTTACATCCTTGAAGCCATAGCTTACTTTTATCCGCCTATGATTGCTCTCTGCCAGGAGCTG GCAAAAAAAGGGGTTGAATTTTCATTCCTGATGTCTGAATCCGTCTATGAACGGTATTATACTGATTATATTGAAGATCT CAGGGATATGCTGGCTCTTAAAAACGTAAAATTTTTCCGATATTCGGGCGAGCTGAAAATTGCAAGCCTTACAGTTACCG ACAAATTTTTTATGCTTTCACTCTTCCCTAAAAACCAGAGGCATTTTGACAGGGAGAGCCTTATATGCCACGAGCCTGCC GCGCTGAGTCTGGGGACAGAACTTTTCAATGAACTGCTGCTTGATTCAACGCAAATTACTGAAGTCCCTCATAAGTAA
Upstream 100 bases:
>100_bases AATAGTCAAACAAGGTAATAACTTATATATTTTTGATGGCTGTAATATTTTTAGTCTTATCTTTATCTTTCTAGCTTTAG CAATGATAGGAGACTGAAGG
Downstream 100 bases:
>100_bases CAAAAATCTGTGGAAGCAGAAAAAATAAGATGCCACCAGATGCCCTTTATATCAACTATTTTTGAGCTCTGGATGGTCTT CTTCCGGTTAACAGGATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MKLELIELIFLSDKRKQLLLFLRSGTKNMDEITEALQVTSTSILPQIKKLKDMSLVLQEDRSYTLSPIGKVLVEKMQPLV STIELFEDNFEYWSEKDLQAFTLSFKKRLGELGKCKLIQPDLDRMFELDPEVVEGLSSSAYILEAIAYFYPPMIALCQEL AKKGVEFSFLMSESVYERYYTDYIEDLRDMLALKNVKFFRYSGELKIASLTVTDKFFMLSLFPKNQRHFDRESLICHEPA ALSLGTELFNELLLDSTQITEVPHK
Sequences:
>Translated_265_residues MKLELIELIFLSDKRKQLLLFLRSGTKNMDEITEALQVTSTSILPQIKKLKDMSLVLQEDRSYTLSPIGKVLVEKMQPLV STIELFEDNFEYWSEKDLQAFTLSFKKRLGELGKCKLIQPDLDRMFELDPEVVEGLSSSAYILEAIAYFYPPMIALCQEL AKKGVEFSFLMSESVYERYYTDYIEDLRDMLALKNVKFFRYSGELKIASLTVTDKFFMLSLFPKNQRHFDRESLICHEPA ALSLGTELFNELLLDSTQITEVPHK >Mature_265_residues MKLELIELIFLSDKRKQLLLFLRSGTKNMDEITEALQVTSTSILPQIKKLKDMSLVLQEDRSYTLSPIGKVLVEKMQPLV STIELFEDNFEYWSEKDLQAFTLSFKKRLGELGKCKLIQPDLDRMFELDPEVVEGLSSSAYILEAIAYFYPPMIALCQEL AKKGVEFSFLMSESVYERYYTDYIEDLRDMLALKNVKFFRYSGELKIASLTVTDKFFMLSLFPKNQRHFDRESLICHEPA ALSLGTELFNELLLDSTQITEVPHK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30749; Mature: 30749
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLELIELIFLSDKRKQLLLFLRSGTKNMDEITEALQVTSTSILPQIKKLKDMSLVLQED CCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RSYTLSPIGKVLVEKMQPLVSTIELFEDNFEYWSEKDLQAFTLSFKKRLGELGKCKLIQP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEECC DLDRMFELDPEVVEGLSSSAYILEAIAYFYPPMIALCQELAKKGVEFSFLMSESVYERYY CHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHH TDYIEDLRDMLALKNVKFFRYSGELKIASLTVTDKFFMLSLFPKNQRHFDRESLICHEPA HHHHHHHHHHHHHHCCCEEEEECCEEEEEEEEEHHHHHEEECCCCCCCCCHHHCEECCCH ALSLGTELFNELLLDSTQITEVPHK HHHHHHHHHHHHHHCCHHHCCCCCC >Mature Secondary Structure MKLELIELIFLSDKRKQLLLFLRSGTKNMDEITEALQVTSTSILPQIKKLKDMSLVLQED CCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RSYTLSPIGKVLVEKMQPLVSTIELFEDNFEYWSEKDLQAFTLSFKKRLGELGKCKLIQP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEECC DLDRMFELDPEVVEGLSSSAYILEAIAYFYPPMIALCQELAKKGVEFSFLMSESVYERYY CHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHH TDYIEDLRDMLALKNVKFFRYSGELKIASLTVTDKFFMLSLFPKNQRHFDRESLICHEPA HHHHHHHHHHHHHHCCCEEEEECCEEEEEEEEEHHHHHEEECCCCCCCCCHHHCEECCCH ALSLGTELFNELLLDSTQITEVPHK HHHHHHHHHHHHHHCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA