Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
---|---|
Accession | NC_003901 |
Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21226366
Identifier: 21226366
GI number: 21226366
Start: 353472
End: 353765
Strand: Reverse
Name: 21226366
Synonym: MM_0264
Alternate gene names: NA
Gene position: 353765-353472 (Counterclockwise)
Preceding gene: 21226367
Following gene: 21226365
Centisome position: 8.64
GC content: 42.52
Gene sequence:
>294_bases ATGAGTTTCACGCTTAATATAGAAACTGGTTTTTCACCTCAGGAAGTACGTGAGGCTATCCGTTCTGCTCTGGAACATGA AAAACATGTTGCAAAATACAAGATCGATCGATATTCTGCGATCTGTAAGGGTTTCGAGAAAAAGTTCGGGTACGGCTCAG GTGAGCTCAGGGAAAGGTTTGAAGCCGGTGGTATTGGAAAAGATAGTGATTTCTTTGACTGGTATACTGCGAAAAGAGAG CTTGATCACTGGAACCGGAAACTTGAGATCCTTTCCGGGATTTCTTTTTCATAG
Upstream 100 bases:
>100_bases TCCCGGCTAATAAGCTACTATGTTCAGCTGTTTATTTTCATAATTACTTTATATGAAGCAAGCAATCACAAAATAAGAAA TTTCTTTTACCGGGATAGAC
Downstream 100 bases:
>100_bases TGGGCTTAATATCTTTCCAGTGAAGTCAGGCTATGATTTATTCCTGAAGTTTTCTCTCTTTTTCTGAAGTTTTCTCTCTT TTCTGAATTGTTCTTCCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MSFTLNIETGFSPQEVREAIRSALEHEKHVAKYKIDRYSAICKGFEKKFGYGSGELRERFEAGGIGKDSDFFDWYTAKRE LDHWNRKLEILSGISFS
Sequences:
>Translated_97_residues MSFTLNIETGFSPQEVREAIRSALEHEKHVAKYKIDRYSAICKGFEKKFGYGSGELRERFEAGGIGKDSDFFDWYTAKRE LDHWNRKLEILSGISFS >Mature_96_residues SFTLNIETGFSPQEVREAIRSALEHEKHVAKYKIDRYSAICKGFEKKFGYGSGELRERFEAGGIGKDSDFFDWYTAKREL DHWNRKLEILSGISFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11259; Mature: 11128
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTLNIETGFSPQEVREAIRSALEHEKHVAKYKIDRYSAICKGFEKKFGYGSGELRERF CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH EAGGIGKDSDFFDWYTAKRELDHWNRKLEILSGISFS HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SFTLNIETGFSPQEVREAIRSALEHEKHVAKYKIDRYSAICKGFEKKFGYGSGELRERF CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH EAGGIGKDSDFFDWYTAKRELDHWNRKLEILSGISFS HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA