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The map label for this gene is ribC [H]

Identifier: 21226347

GI number: 21226347

Start: 327133

End: 327597

Strand: Reverse

Name: ribC [H]

Synonym: MM_0245

Alternate gene names: 21226347

Gene position: 327597-327133 (Counterclockwise)

Preceding gene: 21226348

Following gene: 21226346

Centisome position: 8.0

GC content: 46.67

Gene sequence:

>465_bases
ATGCCTACAATAGGGATTGCAGATACAACGTTTGCGCGCTATAATATGGGGCGTGCAGCAATTGACGAGATACAGAAAAA
TGTATCCGCACAGATTAAAAGAGTAACCGTACCCGGCATAAAGGACCTTCCGGTAGCAGCCAAAAAGCTTATCGAAGAAG
AAGGCTGCGACATAGTAATGGCCCTTGGCATGCCTGGCGGCAAAGAAAAAGACAAAATGTGCGCTCATGAAGCTTCTCAG
GGTCTTATTATGGCCCAGCTCATGACCAATACCCATATTATTGAGGTCTTTGTCCATGAGGATGAAGGAAAAGATGAGAA
AGAACTCGCATTTCTGATGGACAGGCGGACCCGCGAACATGCTTTAAATGTGATAAAACTGCTCTTCAAGCCGGAAAAAC
TGGTCAGGGAAGCCGGCACCGGTCAAAGACAGGGGTTTGAAGATGCAGGCCCTTTAAGAATGTGA

Upstream 100 bases:

>100_bases
TTGACAGGCTATGAGAGGATTTTAAAAATTCTCCATGCCAGAGTTTATAAACGTTTCAGGAATACCAGAAGAACATATCT
TAAATTCCGATCGGATTCAC

Downstream 100 bases:

>100_bases
TGTGACTTTAGTAACTTTAAATTAAAAACAAGACTGGAGACCTTATTCGATGACTATCAGCCTAGGATTTGTTGTAGCTG
AATTTAACAGGGATCTTACC

Product: riboflavin synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MPTIGIADTTFARYNMGRAAIDEIQKNVSAQIKRVTVPGIKDLPVAAKKLIEEEGCDIVMALGMPGGKEKDKMCAHEASQ
GLIMAQLMTNTHIIEVFVHEDEGKDEKELAFLMDRRTREHALNVIKLLFKPEKLVREAGTGQRQGFEDAGPLRM

Sequences:

>Translated_154_residues
MPTIGIADTTFARYNMGRAAIDEIQKNVSAQIKRVTVPGIKDLPVAAKKLIEEEGCDIVMALGMPGGKEKDKMCAHEASQ
GLIMAQLMTNTHIIEVFVHEDEGKDEKELAFLMDRRTREHALNVIKLLFKPEKLVREAGTGQRQGFEDAGPLRM
>Mature_153_residues
PTIGIADTTFARYNMGRAAIDEIQKNVSAQIKRVTVPGIKDLPVAAKKLIEEEGCDIVMALGMPGGKEKDKMCAHEASQG
LIMAQLMTNTHIIEVFVHEDEGKDEKELAFLMDRRTREHALNVIKLLFKPEKLVREAGTGQRQGFEDAGPLRM

Specific function: Unknown

COG id: COG1731

COG function: function code H; Archaeal riboflavin synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DMRL synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002180
- InterPro:   IPR006399 [H]

Pfam domain/function: PF00885 DMRL_synthase [H]

EC number: =2.5.1.9 [H]

Molecular weight: Translated: 17104; Mature: 16973

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTIGIADTTFARYNMGRAAIDEIQKNVSAQIKRVTVPGIKDLPVAAKKLIEEEGCDIVM
CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHCCCCEEE
ALGMPGGKEKDKMCAHEASQGLIMAQLMTNTHIIEVFVHEDEGKDEKELAFLMDRRTREH
EECCCCCCCHHHHHHHHHHCCEEHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHH
ALNVIKLLFKPEKLVREAGTGQRQGFEDAGPLRM
HHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PTIGIADTTFARYNMGRAAIDEIQKNVSAQIKRVTVPGIKDLPVAAKKLIEEEGCDIVM
CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHCCCCEEE
ALGMPGGKEKDKMCAHEASQGLIMAQLMTNTHIIEVFVHEDEGKDEKELAFLMDRRTREH
EECCCCCCCHHHHHHHHHHCCEEHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHH
ALNVIKLLFKPEKLVREAGTGQRQGFEDAGPLRM
HHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]