Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226317

Identifier: 21226317

GI number: 21226317

Start: 292853

End: 293968

Strand: Reverse

Name: 21226317

Synonym: MM_0215

Alternate gene names: NA

Gene position: 293968-292853 (Counterclockwise)

Preceding gene: 21226318

Following gene: 21226316

Centisome position: 7.18

GC content: 47.49

Gene sequence:

>1116_bases
ATGAGGCAGCCTGAGTTTAAAATTGCGTTTGCGTTACTCATGGCTTTGATTTTATGTGCAGTTCCGGCTTCTGCAGGCAG
TGCAGAAAGGGTTCTTCCGTCTTCAGTCAGTGCTAATGAGGTGTTTCAGGTAACAGTCAATGTAGCTGATTACGGCGCAG
CAGGTCAGGTGCTTGAAAAGCTTCCTGCAGGTTTCACATTTGTCAGCTCAACCCTTCCGGAAAAAGCTGTAACTGTAAAC
GGAGATAAGGTCTCCTTCCTGCTGATGACAGAAAAAAGCTTCAGCTACACTCTTAAAGCTCCTGCATCATCCGGAACATA
CCAGTTTTCGGGTATTTTAAGGGACATAAACAAAGCTGAATTCCCTATACTCCCTTCAAGCTCTTCCATTAAGGTCGGGT
CAAGCTCTGGCGGGGGTTCAGGCGGCGGCTCAAAAAGTTCAGGCAGCAGTTCAGGCGGCGGAGCCGGAGGTTCCCCGGAA
CCTCAGAACAATGTTGAGGCTAAGGAGCTTTCCCAGTCGTATGTTTCTGACGGAAAACACGTAAGGTTCGATTTCCCCAA
TGGTGTAACCTGCATAAGATATGTGGAGTTTGATGCCAGAAAGACCCTCGGGAAGATCACCACTATTGTTGAAATGCTTA
AAGGCCAGTCGAAGCTGGTCCCGAGCCTGCCTGAAGGCACGGTTTATAAAAACGTAAACATCTGGGTGGGTTCCGGAGGA
ATCGCAAATTCCGATAATATCAAAAACGCGGTAGTTGGCTTCAGGGTTGAAAAAACCTGGCTTGATAAATATGGGGTTGA
CACGGATGACAAAGATTCGCTTAACCTCTGGTATTATGACAAAGGATGGACTAAACTCGAAACCACCAAACTGGATGAGA
GTGACAGTACCTATGTCTATTATGAAGCCAGGACTCCGGGATTCGGGTCATTTGCAATTGTTGCAGCCGAACCCGCTTCA
ATAGAAATCGAGCCTGTTGATGAAGATACGGAAGGCAATATCTCTTCCGAGCCACAGAAGCCTGTAAGGAACTGGCGTTC
TATGCCTGGATTTGAATCTGCTGCTCTTCTGGGAGCAGTCGGAGCTGCATATTGCGTCATGAGAAGGAAGTTTTGA

Upstream 100 bases:

>100_bases
CTGCCGAAGAAATCAAAAATATTGTAAGTGACGGTAAAATCTCCAGCGCGGTCAAATATGCAATTCTGAACATTTACTAT
GCTGACGGGTGGGATAGGAT

Downstream 100 bases:

>100_bases
TGCCCGATAAATTTACGGTTTAAAGCAGCTTTAAACGCTGCTTTTTTCTCTTTTTTCACCCGAATTCCTTCTCGCCTGAG
TCCCGTCTCGGGAGTACGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MRQPEFKIAFALLMALILCAVPASAGSAERVLPSSVSANEVFQVTVNVADYGAAGQVLEKLPAGFTFVSSTLPEKAVTVN
GDKVSFLLMTEKSFSYTLKAPASSGTYQFSGILRDINKAEFPILPSSSSIKVGSSSGGGSGGGSKSSGSSSGGGAGGSPE
PQNNVEAKELSQSYVSDGKHVRFDFPNGVTCIRYVEFDARKTLGKITTIVEMLKGQSKLVPSLPEGTVYKNVNIWVGSGG
IANSDNIKNAVVGFRVEKTWLDKYGVDTDDKDSLNLWYYDKGWTKLETTKLDESDSTYVYYEARTPGFGSFAIVAAEPAS
IEIEPVDEDTEGNISSEPQKPVRNWRSMPGFESAALLGAVGAAYCVMRRKF

Sequences:

>Translated_371_residues
MRQPEFKIAFALLMALILCAVPASAGSAERVLPSSVSANEVFQVTVNVADYGAAGQVLEKLPAGFTFVSSTLPEKAVTVN
GDKVSFLLMTEKSFSYTLKAPASSGTYQFSGILRDINKAEFPILPSSSSIKVGSSSGGGSGGGSKSSGSSSGGGAGGSPE
PQNNVEAKELSQSYVSDGKHVRFDFPNGVTCIRYVEFDARKTLGKITTIVEMLKGQSKLVPSLPEGTVYKNVNIWVGSGG
IANSDNIKNAVVGFRVEKTWLDKYGVDTDDKDSLNLWYYDKGWTKLETTKLDESDSTYVYYEARTPGFGSFAIVAAEPAS
IEIEPVDEDTEGNISSEPQKPVRNWRSMPGFESAALLGAVGAAYCVMRRKF
>Mature_371_residues
MRQPEFKIAFALLMALILCAVPASAGSAERVLPSSVSANEVFQVTVNVADYGAAGQVLEKLPAGFTFVSSTLPEKAVTVN
GDKVSFLLMTEKSFSYTLKAPASSGTYQFSGILRDINKAEFPILPSSSSIKVGSSSGGGSGGGSKSSGSSSGGGAGGSPE
PQNNVEAKELSQSYVSDGKHVRFDFPNGVTCIRYVEFDARKTLGKITTIVEMLKGQSKLVPSLPEGTVYKNVNIWVGSGG
IANSDNIKNAVVGFRVEKTWLDKYGVDTDDKDSLNLWYYDKGWTKLETTKLDESDSTYVYYEARTPGFGSFAIVAAEPAS
IEIEPVDEDTEGNISSEPQKPVRNWRSMPGFESAALLGAVGAAYCVMRRKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39601; Mature: 39601

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQPEFKIAFALLMALILCAVPASAGSAERVLPSSVSANEVFQVTVNVADYGAAGQVLEK
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHH
LPAGFTFVSSTLPEKAVTVNGDKVSFLLMTEKSFSYTLKAPASSGTYQFSGILRDINKAE
CCCCEEEHHHCCCCCEEEECCCEEEEEEEECCCCEEEEECCCCCCCEEHHHHHHHCCCCC
FPILPSSSSIKVGSSSGGGSGGGSKSSGSSSGGGAGGSPEPQNNVEAKELSQSYVSDGKH
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCE
VRFDFPNGVTCIRYVEFDARKTLGKITTIVEMLKGQSKLVPSLPEGTVYKNVNIWVGSGG
EEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCC
IANSDNIKNAVVGFRVEKTWLDKYGVDTDDKDSLNLWYYDKGWTKLETTKLDESDSTYVY
CCCCCCCCCEEEEEEEEHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEE
YEARTPGFGSFAIVAAEPASIEIEPVDEDTEGNISSEPQKPVRNWRSMPGFESAALLGAV
EEECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHH
GAAYCVMRRKF
HHHHHHHHCCC
>Mature Secondary Structure
MRQPEFKIAFALLMALILCAVPASAGSAERVLPSSVSANEVFQVTVNVADYGAAGQVLEK
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHH
LPAGFTFVSSTLPEKAVTVNGDKVSFLLMTEKSFSYTLKAPASSGTYQFSGILRDINKAE
CCCCEEEHHHCCCCCEEEECCCEEEEEEEECCCCEEEEECCCCCCCEEHHHHHHHCCCCC
FPILPSSSSIKVGSSSGGGSGGGSKSSGSSSGGGAGGSPEPQNNVEAKELSQSYVSDGKH
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCE
VRFDFPNGVTCIRYVEFDARKTLGKITTIVEMLKGQSKLVPSLPEGTVYKNVNIWVGSGG
EEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCC
IANSDNIKNAVVGFRVEKTWLDKYGVDTDDKDSLNLWYYDKGWTKLETTKLDESDSTYVY
CCCCCCCCCEEEEEEEEHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEE
YEARTPGFGSFAIVAAEPASIEIEPVDEDTEGNISSEPQKPVRNWRSMPGFESAALLGAV
EEECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHH
GAAYCVMRRKF
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA