Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226290
Identifier: 21226290
GI number: 21226290
Start: 260539
End: 260886
Strand: Direct
Name: 21226290
Synonym: MM_0188
Alternate gene names: NA
Gene position: 260539-260886 (Clockwise)
Preceding gene: 21226289
Following gene: 21226292
Centisome position: 6.36
GC content: 41.67
Gene sequence:
>348_bases ATGAGATCTCCGCTTCTATACCTTTCTGAAATGCTCGATTCTTCCAGAAATATAAAGGATTTCTTGCAAGGTATGGAAAA AGAGACTTTTTTAAAGGACGAGAAAACCAGGAGTGCAGTTGCTCATCAGTTACTGATACTGGGAGAGGCATCGAAAGCCA TCCCCGCAGATATAAAGTCACGAGCCCCAAACCTTGATTGGAAAGGTATGGCAGGTATGAGGGATCGCTTGATACACGCC TATTTTAATGTCGATTATGATCTTGTCTGGGATACCGCTAAAAACAGAGTTCCCATGGTTGAGAGAGAGCTTGAAAAACT GATTGAAGAGTTGAGTTTTAGCAATTGA
Upstream 100 bases:
>100_bases ATTACCTCGAAGATCTTTTTGGAATCTCAGTGGATGTTGTTTCGGAGAGAGCTCTTCACCCGATGATGAAGGATGACGTG CTAAGAGAACTGGTGCCGGT
Downstream 100 bases:
>100_bases TTATTAAAAATTGCCCGGCGGTTTGTATTCAAGCTTCGATGCTTTCTCCATAGCCTCCATGCCGTCGTTGAGTGACAGCA ACGGTGTAGTCCTGGAGATC
Product: nucleotidyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MRSPLLYLSEMLDSSRNIKDFLQGMEKETFLKDEKTRSAVAHQLLILGEASKAIPADIKSRAPNLDWKGMAGMRDRLIHA YFNVDYDLVWDTAKNRVPMVERELEKLIEELSFSN
Sequences:
>Translated_115_residues MRSPLLYLSEMLDSSRNIKDFLQGMEKETFLKDEKTRSAVAHQLLILGEASKAIPADIKSRAPNLDWKGMAGMRDRLIHA YFNVDYDLVWDTAKNRVPMVERELEKLIEELSFSN >Mature_115_residues MRSPLLYLSEMLDSSRNIKDFLQGMEKETFLKDEKTRSAVAHQLLILGEASKAIPADIKSRAPNLDWKGMAGMRDRLIHA YFNVDYDLVWDTAKNRVPMVERELEKLIEELSFSN
Specific function: Unknown
COG id: COG2361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0331 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008201 [H]
Pfam domain/function: PF01934 DUF86 [H]
EC number: NA
Molecular weight: Translated: 13302; Mature: 13302
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSPLLYLSEMLDSSRNIKDFLQGMEKETFLKDEKTRSAVAHQLLILGEASKAIPADIKS CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH RAPNLDWKGMAGMRDRLIHAYFNVDYDLVWDTAKNRVPMVERELEKLIEELSFSN CCCCCCCCCCCHHHHHHHHHHHCCCHHEEECCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRSPLLYLSEMLDSSRNIKDFLQGMEKETFLKDEKTRSAVAHQLLILGEASKAIPADIKS CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH RAPNLDWKGMAGMRDRLIHAYFNVDYDLVWDTAKNRVPMVERELEKLIEELSFSN CCCCCCCCCCCHHHHHHHHHHHCCCHHEEECCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]