Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226290

Identifier: 21226290

GI number: 21226290

Start: 260539

End: 260886

Strand: Direct

Name: 21226290

Synonym: MM_0188

Alternate gene names: NA

Gene position: 260539-260886 (Clockwise)

Preceding gene: 21226289

Following gene: 21226292

Centisome position: 6.36

GC content: 41.67

Gene sequence:

>348_bases
ATGAGATCTCCGCTTCTATACCTTTCTGAAATGCTCGATTCTTCCAGAAATATAAAGGATTTCTTGCAAGGTATGGAAAA
AGAGACTTTTTTAAAGGACGAGAAAACCAGGAGTGCAGTTGCTCATCAGTTACTGATACTGGGAGAGGCATCGAAAGCCA
TCCCCGCAGATATAAAGTCACGAGCCCCAAACCTTGATTGGAAAGGTATGGCAGGTATGAGGGATCGCTTGATACACGCC
TATTTTAATGTCGATTATGATCTTGTCTGGGATACCGCTAAAAACAGAGTTCCCATGGTTGAGAGAGAGCTTGAAAAACT
GATTGAAGAGTTGAGTTTTAGCAATTGA

Upstream 100 bases:

>100_bases
ATTACCTCGAAGATCTTTTTGGAATCTCAGTGGATGTTGTTTCGGAGAGAGCTCTTCACCCGATGATGAAGGATGACGTG
CTAAGAGAACTGGTGCCGGT

Downstream 100 bases:

>100_bases
TTATTAAAAATTGCCCGGCGGTTTGTATTCAAGCTTCGATGCTTTCTCCATAGCCTCCATGCCGTCGTTGAGTGACAGCA
ACGGTGTAGTCCTGGAGATC

Product: nucleotidyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MRSPLLYLSEMLDSSRNIKDFLQGMEKETFLKDEKTRSAVAHQLLILGEASKAIPADIKSRAPNLDWKGMAGMRDRLIHA
YFNVDYDLVWDTAKNRVPMVERELEKLIEELSFSN

Sequences:

>Translated_115_residues
MRSPLLYLSEMLDSSRNIKDFLQGMEKETFLKDEKTRSAVAHQLLILGEASKAIPADIKSRAPNLDWKGMAGMRDRLIHA
YFNVDYDLVWDTAKNRVPMVERELEKLIEELSFSN
>Mature_115_residues
MRSPLLYLSEMLDSSRNIKDFLQGMEKETFLKDEKTRSAVAHQLLILGEASKAIPADIKSRAPNLDWKGMAGMRDRLIHA
YFNVDYDLVWDTAKNRVPMVERELEKLIEELSFSN

Specific function: Unknown

COG id: COG2361

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0331 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008201 [H]

Pfam domain/function: PF01934 DUF86 [H]

EC number: NA

Molecular weight: Translated: 13302; Mature: 13302

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSPLLYLSEMLDSSRNIKDFLQGMEKETFLKDEKTRSAVAHQLLILGEASKAIPADIKS
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
RAPNLDWKGMAGMRDRLIHAYFNVDYDLVWDTAKNRVPMVERELEKLIEELSFSN
CCCCCCCCCCCHHHHHHHHHHHCCCHHEEECCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRSPLLYLSEMLDSSRNIKDFLQGMEKETFLKDEKTRSAVAHQLLILGEASKAIPADIKS
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
RAPNLDWKGMAGMRDRLIHAYFNVDYDLVWDTAKNRVPMVERELEKLIEELSFSN
CCCCCCCCCCCHHHHHHHHHHHCCCHHEEECCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]