Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226289

Identifier: 21226289

GI number: 21226289

Start: 260231

End: 260542

Strand: Direct

Name: 21226289

Synonym: MM_0187

Alternate gene names: NA

Gene position: 260231-260542 (Clockwise)

Preceding gene: 21226287

Following gene: 21226290

Centisome position: 6.35

GC content: 41.35

Gene sequence:

>312_bases
ATGGAAGATAAAGAAATACACATTGATGTCAATCAGATCCGGCTTCTTATCCTGGAAAGAAAGGATGAAATAAAAGAAAA
ATTCAAAGCTGAGATCATTGGAATTTTTGGTTCATATGCACGTGGAGAGGAAAAAGAGGGAAGTGATATTGATGTCCTGG
TAAGATTTGGAGAAGGAGCATCCCTTTTTGAGCTTGTGGGGCTTGGAGATTACCTCGAAGATCTTTTTGGAATCTCAGTG
GATGTTGTTTCGGAGAGAGCTCTTCACCCGATGATGAAGGATGACGTGCTAAGAGAACTGGTGCCGGTATGA

Upstream 100 bases:

>100_bases
AAAACTGCAGAAAAAGAATATACACATGAAATATTATATCAGTATAGAGAAAAGTAGCCATATAATTCCAGCAGTGAAAG
AAATATAAGAGACGGATATT

Downstream 100 bases:

>100_bases
GATCTCCGCTTCTATACCTTTCTGAAATGCTCGATTCTTCCAGAAATATAAAGGATTTCTTGCAAGGTATGGAAAAAGAG
ACTTTTTTAAAGGACGAGAA

Product: nucleotidyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MEDKEIHIDVNQIRLLILERKDEIKEKFKAEIIGIFGSYARGEEKEGSDIDVLVRFGEGASLFELVGLGDYLEDLFGISV
DVVSERALHPMMKDDVLRELVPV

Sequences:

>Translated_103_residues
MEDKEIHIDVNQIRLLILERKDEIKEKFKAEIIGIFGSYARGEEKEGSDIDVLVRFGEGASLFELVGLGDYLEDLFGISV
DVVSERALHPMMKDDVLRELVPV
>Mature_103_residues
MEDKEIHIDVNQIRLLILERKDEIKEKFKAEIIGIFGSYARGEEKEGSDIDVLVRFGEGASLFELVGLGDYLEDLFGISV
DVVSERALHPMMKDDVLRELVPV

Specific function: Unknown

COG id: COG1669

COG function: function code R; Predicted nucleotidyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the M.jannaschii MJ0126/MJ0128/MJ0141/MJ0435/MJ0604/MJ1215/MJ1217/MJ1305/MJ1379 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002934 [H]

Pfam domain/function: PF01909 NTP_transf_2 [H]

EC number: NA

Molecular weight: Translated: 11692; Mature: 11692

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDKEIHIDVNQIRLLILERKDEIKEKFKAEIIGIFGSYARGEEKEGSDIDVLVRFGEGA
CCCCEEEEEHHHHHEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCC
SLFELVGLGDYLEDLFGISVDVVSERALHPMMKDDVLRELVPV
CHHHHHCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure
MEDKEIHIDVNQIRLLILERKDEIKEKFKAEIIGIFGSYARGEEKEGSDIDVLVRFGEGA
CCCCEEEEEHHHHHEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCC
SLFELVGLGDYLEDLFGISVDVVSERALHPMMKDDVLRELVPV
CHHHHHCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]