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The map label for this gene is rps3Ae [H]

Identifier: 21226286

GI number: 21226286

Start: 257036

End: 257650

Strand: Reverse

Name: rps3Ae [H]

Synonym: MM_0184

Alternate gene names: 21226286

Gene position: 257650-257036 (Counterclockwise)

Preceding gene: 21226288

Following gene: 161485683

Centisome position: 6.29

GC content: 51.87

Gene sequence:

>615_bases
TTGGCAAGAAAGAAAGTACAGAGAAAGCTTGACGGATGGAAATCCAAGGAATGGTATAACATTGAAGCCCCTGCTTACTT
AAACAGGGTTATTGTCGGAACTACAATGGCAGGAGACCCTTCCCTGCTTGTTGGCCGCAATGTTGAGACCACAGTCGGGG
AACTCACAAACGACATGACCAAGAACAACACAAAGGTCATCCTCAGGGTCAACAACGTTGTCGGAGACATAGCCACCACC
GACCTCATGGGCCACGAACTCACAACCGACTATGTCCGCTCTATCGTAAAGAGGCAGACCTCCAGGATCGATGCAAACGT
CGATGTCCGGACCAAAGACGGCTTTGTTATCCGCGTCAAGCCAACCTGCTTCACCATCAAGAGAGCACGCTCAAGCCAGA
TGCAGGCTATCAGGGAAATGATGGTTGACATCGTCAAAAAGCGCGCATCAGAAACCGATTTCGAGACCTTTATGCAGGAA
GCAATCCTTGGCAGGCTCTCAGCAGCCATCTACAGGCAGGCCAAGTTCATCTATCCGCTCCGCAGAGTTGAGATCAGGAA
GACCCAGGTCGAAGCAATGCCCGCAGCTGCACCAGCCGCACCTGCCGCAGCATAA

Upstream 100 bases:

>100_bases
TCATCCGAGCATCCGGAAGATAAAAACCTGAAGTCGCCAGAGGGCGCCAGGTCAAAGCAAAATAAAACTACATACACGAA
ATTTACTTCGGAGGAATTAC

Downstream 100 bases:

>100_bases
TTATTTTCGACTGAAAATTAGAAGCAGGAGAAAATCCGAAAGGATTTTCTTATCTCTCTTTTGAATTTTGTTATTTCGGA
ACACTCTTCTCTTTTCTAAA

Product: 30S ribosomal protein S3Ae

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MARKKVQRKLDGWKSKEWYNIEAPAYLNRVIVGTTMAGDPSLLVGRNVETTVGELTNDMTKNNTKVILRVNNVVGDIATT
DLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIKRARSSQMQAIREMMVDIVKKRASETDFETFMQE
AILGRLSAAIYRQAKFIYPLRRVEIRKTQVEAMPAAAPAAPAAA

Sequences:

>Translated_204_residues
MARKKVQRKLDGWKSKEWYNIEAPAYLNRVIVGTTMAGDPSLLVGRNVETTVGELTNDMTKNNTKVILRVNNVVGDIATT
DLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIKRARSSQMQAIREMMVDIVKKRASETDFETFMQE
AILGRLSAAIYRQAKFIYPLRRVEIRKTQVEAMPAAAPAAPAAA
>Mature_203_residues
ARKKVQRKLDGWKSKEWYNIEAPAYLNRVIVGTTMAGDPSLLVGRNVETTVGELTNDMTKNNTKVILRVNNVVGDIATTD
LMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIKRARSSQMQAIREMMVDIVKKRASETDFETFMQEA
ILGRLSAAIYRQAKFIYPLRRVEIRKTQVEAMPAAAPAAPAAA

Specific function: Unknown

COG id: COG1890

COG function: function code J; Ribosomal protein S3AE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S3Ae family [H]

Homologues:

Organism=Homo sapiens, GI4506723, Length=203, Percent_Identity=30.5418719211823, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17553700, Length=201, Percent_Identity=28.8557213930348, Blast_Score=80, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6323474, Length=209, Percent_Identity=30.622009569378, Blast_Score=93, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6323577, Length=200, Percent_Identity=30, Blast_Score=91, Evalue=1e-19,
Organism=Drosophila melanogaster, GI17864162, Length=203, Percent_Identity=29.064039408867, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24638499, Length=161, Percent_Identity=31.055900621118, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24638501, Length=118, Percent_Identity=34.7457627118644, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001593
- InterPro:   IPR018281 [H]

Pfam domain/function: PF01015 Ribosomal_S3Ae [H]

EC number: NA

Molecular weight: Translated: 22949; Mature: 22818

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: PS01191 RIBOSOMAL_S3AE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKKVQRKLDGWKSKEWYNIEAPAYLNRVIVGTTMAGDPSLLVGRNVETTVGELTNDMT
CCHHHHHHHHCCCCCCCCEECCCHHHHHHEEEEEECCCCCCEEECCCCHHHHHHHHHHHC
KNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVK
CCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEC
PTCFTIKRARSSQMQAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIYRQAKFIYPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRVEIRKTQVEAMPAAAPAAPAAA
HHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ARKKVQRKLDGWKSKEWYNIEAPAYLNRVIVGTTMAGDPSLLVGRNVETTVGELTNDMT
CHHHHHHHHCCCCCCCCEECCCHHHHHHEEEEEECCCCCCEEECCCCHHHHHHHHHHHC
KNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVK
CCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEC
PTCFTIKRARSSQMQAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIYRQAKFIYPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRVEIRKTQVEAMPAAAPAAPAAA
HHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA