Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226288

Identifier: 21226288

GI number: 21226288

Start: 259621

End: 259953

Strand: Reverse

Name: 21226288

Synonym: MM_0186

Alternate gene names: NA

Gene position: 259953-259621 (Counterclockwise)

Preceding gene: 21226291

Following gene: 21226286

Centisome position: 6.35

GC content: 44.14

Gene sequence:

>333_bases
ATGCAAGATTACCTGATTCAAATATCCTATACGCCTGAAGCGGTAGCCAGATTAGTAAAAAATCCGGAAAATCGCGAAGA
AGTGGCACGTTTTTTAATGGAAAAACTTGGGGGAAAACTTAAAGGTTTCTGGGTTTCATTTGGTGAATATGACTTGGTAG
AAATTGCGACATTACCTGATAATGTAAGTGCAGAAGCCCTAACAATGGTTCTCCTGGCTGGAGGTGCCGTAAAGATGGTC
AGGACCACACCGTTGATGTCGGTCAACGAAGGCATGGAGGCTATGGAGAAAGCAGCGAAGCTGGAACTGGAATACAGACC
ACCAGGCAAATAA

Upstream 100 bases:

>100_bases
GCTATTCTACAAAAGCACTCAATTTTATTTAAAACCTTTAATAGATATGTATATATTTTATCTATAGAAATATTAATCCA
AGTAATTGGGAGGGGAATTT

Downstream 100 bases:

>100_bases
TTAAGAAGAAATCGCTTTTTCTTTTTTACCTGGCTTTCAACCAGCTTTTCGGATCAGTCTTATCTCGGTATGCAGTCGAA
AATTAAAAAAGAATAAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MQDYLIQISYTPEAVARLVKNPENREEVARFLMEKLGGKLKGFWVSFGEYDLVEIATLPDNVSAEALTMVLLAGGAVKMV
RTTPLMSVNEGMEAMEKAAKLELEYRPPGK

Sequences:

>Translated_110_residues
MQDYLIQISYTPEAVARLVKNPENREEVARFLMEKLGGKLKGFWVSFGEYDLVEIATLPDNVSAEALTMVLLAGGAVKMV
RTTPLMSVNEGMEAMEKAAKLELEYRPPGK
>Mature_110_residues
MQDYLIQISYTPEAVARLVKNPENREEVARFLMEKLGGKLKGFWVSFGEYDLVEIATLPDNVSAEALTMVLLAGGAVKMV
RTTPLMSVNEGMEAMEKAAKLELEYRPPGK

Specific function: Unknown

COG id: COG4274

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12236; Mature: 12236

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDYLIQISYTPEAVARLVKNPENREEVARFLMEKLGGKLKGFWVSFGEYDLVEIATLPD
CCCEEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCC
NVSAEALTMVLLAGGAVKMVRTTPLMSVNEGMEAMEKAAKLELEYRPPGK
CCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHEEEECCCCCC
>Mature Secondary Structure
MQDYLIQISYTPEAVARLVKNPENREEVARFLMEKLGGKLKGFWVSFGEYDLVEIATLPD
CCCEEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCC
NVSAEALTMVLLAGGAVKMVRTTPLMSVNEGMEAMEKAAKLELEYRPPGK
CCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA