Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
---|---|
Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is dltE [H]
Identifier: 21226251
GI number: 21226251
Start: 185332
End: 185544
Strand: Direct
Name: dltE [H]
Synonym: MM_0149
Alternate gene names: 21226251
Gene position: 185332-185544 (Clockwise)
Preceding gene: 21226250
Following gene: 21226252
Centisome position: 4.52
GC content: 37.09
Gene sequence:
>213_bases ATGAAAATTAATGGAAACATTGTTTTGATTACTGGAGGAGCAACTGGCATTGGCTTGGCTCTAGCTGAAGCTTTTGTAAA GGCAGGTAGTGAAGTCATTGTCTGTTCAAGGACAGAAAAAAACCTGAAGCAAGCTAAGGAAAAAATCCCTCAATTGCATA TAAAAAAGTGCGATGTTTCTAAAGAATCCGAATGTGAGGAATTGTCAATTTGA
Upstream 100 bases:
>100_bases CCGTGGGTGTGAAAGGAGTAGAAAAATTCAGATACGAGGTACTTTTCGAACAAGATCTAAGTTTGTATTTGCTAATCTTT TTACTAAAAGAGGGGAAGTA
Downstream 100 bases:
>100_bases AGAAAACGTGACTCAGCCACGTATTGCAAAAATGGCTGATTTGGATTTAATGTCAGTATCTCAAATAATCCAAGGGTTGA AAAAACAATTCATTGAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MKINGNIVLITGGATGIGLALAEAFVKAGSEVIVCSRTEKNLKQAKEKIPQLHIKKCDVSKESECEELSI
Sequences:
>Translated_70_residues MKINGNIVLITGGATGIGLALAEAFVKAGSEVIVCSRTEKNLKQAKEKIPQLHIKKCDVSKESECEELSI >Mature_70_residues MKINGNIVLITGGATGIGLALAEAFVKAGSEVIVCSRTEKNLKQAKEKIPQLHIKKCDVSKESECEELSI
Specific function: Unknown
COG id: COG3967
COG function: function code M; Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
None
Paralogues:
None
Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 7484; Mature: 7484
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINGNIVLITGGATGIGLALAEAFVKAGSEVIVCSRTEKNLKQAKEKIPQLHIKKCDVS CEECCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCEEEECCCCC KESECEELSI CCCCCCCCCC >Mature Secondary Structure MKINGNIVLITGGATGIGLALAEAFVKAGSEVIVCSRTEKNLKQAKEKIPQLHIKKCDVS CEECCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCEEEECCCCC KESECEELSI CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377; 7797557 [H]