Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226250

Identifier: 21226250

GI number: 21226250

Start: 184446

End: 185243

Strand: Direct

Name: 21226250

Synonym: MM_0148

Alternate gene names: NA

Gene position: 184446-185243 (Clockwise)

Preceding gene: 21226249

Following gene: 21226251

Centisome position: 4.5

GC content: 46.87

Gene sequence:

>798_bases
GTGATTGTTATCAACAACATCTCTAGTAAAATTAAGGAACTTGGAAAAAAGCTAACCGAAGCTGGTAGATTGAAGCTGCG
TCCTCTGTGTGTCTACGGCACGGACGAGATTCCGAATAACGCAGTACCATCATATAAAATAGATCGCTGCATAGCAAAAG
CAGTCTATACCTCTGCCCTGTTTGAAGATACTCCTCCACTTTACATTGAAGCAGCTCACGAAAAGTGCTGCCCCGGTGGA
ATGGGGTGGATCGGGCTGAGTGAACCTCACCCAATGCTGAAGTACTTCGTGACTGTTGGCACGCCTGACTTCCATGGTGG
AGCTGCCGAACACTTAAAGGCTTCGCCGGAGCTATTTGAAGAGAGTAAGAAACGTGCTGGGAGGATTACTCCACCAGGTA
AATACATTGTCATAGGGCCCTGTAATGATAACATTTCTCCAGATACCATTAGGTCAATAATCTTATTTGCGGGCAGCGAG
CAGATTAGGAACCTGTGCGCGCTAGCACATTTTAACAGTTCTGATCCTTTCTTTAGGACTTTAATACCTTCGGGCCCGAC
CTGCGTTACTATGATAACTTATCCTGCGGGTATGGCAGAGAATGCGCCGAAGGACTCAGCATATGTCGGCCCTACTGATC
CGACTGGAAACCCATGGTTGCCTCCAGACCTGATGGTTATTGGCATCCCTGTGGAACTGGCACATCAGATGGCAGTCAAC
CTAGAAGAGTCTTTCATCTGTAAAAGAAGTAAAATAGCTTATCCTGAGAAACGCACAGTTATAAAGCCGTGGGTGTGA

Upstream 100 bases:

>100_bases
ACGATTCAAATATAATCTTCTTGCCAATAAAGACCACTGGACTCATAACTGTGATTACTGGATTGAAAAAGGTTGGATGT
AAAATTGATTTTTTAGGAAG

Downstream 100 bases:

>100_bases
AAGGAGTAGAAAAATTCAGATACGAGGTACTTTTCGAACAAGATCTAAGTTTGTATTTGCTAATCTTTTTACTAAAAGAG
GGGAAGTAATGAAAATTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MIVINNISSKIKELGKKLTEAGRLKLRPLCVYGTDEIPNNAVPSYKIDRCIAKAVYTSALFEDTPPLYIEAAHEKCCPGG
MGWIGLSEPHPMLKYFVTVGTPDFHGGAAEHLKASPELFEESKKRAGRITPPGKYIVIGPCNDNISPDTIRSIILFAGSE
QIRNLCALAHFNSSDPFFRTLIPSGPTCVTMITYPAGMAENAPKDSAYVGPTDPTGNPWLPPDLMVIGIPVELAHQMAVN
LEESFICKRSKIAYPEKRTVIKPWV

Sequences:

>Translated_265_residues
MIVINNISSKIKELGKKLTEAGRLKLRPLCVYGTDEIPNNAVPSYKIDRCIAKAVYTSALFEDTPPLYIEAAHEKCCPGG
MGWIGLSEPHPMLKYFVTVGTPDFHGGAAEHLKASPELFEESKKRAGRITPPGKYIVIGPCNDNISPDTIRSIILFAGSE
QIRNLCALAHFNSSDPFFRTLIPSGPTCVTMITYPAGMAENAPKDSAYVGPTDPTGNPWLPPDLMVIGIPVELAHQMAVN
LEESFICKRSKIAYPEKRTVIKPWV
>Mature_265_residues
MIVINNISSKIKELGKKLTEAGRLKLRPLCVYGTDEIPNNAVPSYKIDRCIAKAVYTSALFEDTPPLYIEAAHEKCCPGG
MGWIGLSEPHPMLKYFVTVGTPDFHGGAAEHLKASPELFEESKKRAGRITPPGKYIVIGPCNDNISPDTIRSIILFAGSE
QIRNLCALAHFNSSDPFFRTLIPSGPTCVTMITYPAGMAENAPKDSAYVGPTDPTGNPWLPPDLMVIGIPVELAHQMAVN
LEESFICKRSKIAYPEKRTVIKPWV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29025; Mature: 29025

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVINNISSKIKELGKKLTEAGRLKLRPLCVYGTDEIPNNAVPSYKIDRCIAKAVYTSAL
CEEECCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
FEDTPPLYIEAAHEKCCPGGMGWIGLSEPHPMLKYFVTVGTPDFHGGAAEHLKASPELFE
HCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCHHHHH
ESKKRAGRITPPGKYIVIGPCNDNISPDTIRSIILFAGSEQIRNLCALAHFNSSDPFFRT
HHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEE
LIPSGPTCVTMITYPAGMAENAPKDSAYVGPTDPTGNPWLPPDLMVIGIPVELAHQMAVN
ECCCCCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHC
LEESFICKRSKIAYPEKRTVIKPWV
CHHHHHHHHCCCCCCCCCCEECCCC
>Mature Secondary Structure
MIVINNISSKIKELGKKLTEAGRLKLRPLCVYGTDEIPNNAVPSYKIDRCIAKAVYTSAL
CEEECCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
FEDTPPLYIEAAHEKCCPGGMGWIGLSEPHPMLKYFVTVGTPDFHGGAAEHLKASPELFE
HCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCHHHHH
ESKKRAGRITPPGKYIVIGPCNDNISPDTIRSIILFAGSEQIRNLCALAHFNSSDPFFRT
HHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEE
LIPSGPTCVTMITYPAGMAENAPKDSAYVGPTDPTGNPWLPPDLMVIGIPVELAHQMAVN
ECCCCCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHC
LEESFICKRSKIAYPEKRTVIKPWV
CHHHHHHHHCCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA