Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226250
Identifier: 21226250
GI number: 21226250
Start: 184446
End: 185243
Strand: Direct
Name: 21226250
Synonym: MM_0148
Alternate gene names: NA
Gene position: 184446-185243 (Clockwise)
Preceding gene: 21226249
Following gene: 21226251
Centisome position: 4.5
GC content: 46.87
Gene sequence:
>798_bases GTGATTGTTATCAACAACATCTCTAGTAAAATTAAGGAACTTGGAAAAAAGCTAACCGAAGCTGGTAGATTGAAGCTGCG TCCTCTGTGTGTCTACGGCACGGACGAGATTCCGAATAACGCAGTACCATCATATAAAATAGATCGCTGCATAGCAAAAG CAGTCTATACCTCTGCCCTGTTTGAAGATACTCCTCCACTTTACATTGAAGCAGCTCACGAAAAGTGCTGCCCCGGTGGA ATGGGGTGGATCGGGCTGAGTGAACCTCACCCAATGCTGAAGTACTTCGTGACTGTTGGCACGCCTGACTTCCATGGTGG AGCTGCCGAACACTTAAAGGCTTCGCCGGAGCTATTTGAAGAGAGTAAGAAACGTGCTGGGAGGATTACTCCACCAGGTA AATACATTGTCATAGGGCCCTGTAATGATAACATTTCTCCAGATACCATTAGGTCAATAATCTTATTTGCGGGCAGCGAG CAGATTAGGAACCTGTGCGCGCTAGCACATTTTAACAGTTCTGATCCTTTCTTTAGGACTTTAATACCTTCGGGCCCGAC CTGCGTTACTATGATAACTTATCCTGCGGGTATGGCAGAGAATGCGCCGAAGGACTCAGCATATGTCGGCCCTACTGATC CGACTGGAAACCCATGGTTGCCTCCAGACCTGATGGTTATTGGCATCCCTGTGGAACTGGCACATCAGATGGCAGTCAAC CTAGAAGAGTCTTTCATCTGTAAAAGAAGTAAAATAGCTTATCCTGAGAAACGCACAGTTATAAAGCCGTGGGTGTGA
Upstream 100 bases:
>100_bases ACGATTCAAATATAATCTTCTTGCCAATAAAGACCACTGGACTCATAACTGTGATTACTGGATTGAAAAAGGTTGGATGT AAAATTGATTTTTTAGGAAG
Downstream 100 bases:
>100_bases AAGGAGTAGAAAAATTCAGATACGAGGTACTTTTCGAACAAGATCTAAGTTTGTATTTGCTAATCTTTTTACTAAAAGAG GGGAAGTAATGAAAATTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MIVINNISSKIKELGKKLTEAGRLKLRPLCVYGTDEIPNNAVPSYKIDRCIAKAVYTSALFEDTPPLYIEAAHEKCCPGG MGWIGLSEPHPMLKYFVTVGTPDFHGGAAEHLKASPELFEESKKRAGRITPPGKYIVIGPCNDNISPDTIRSIILFAGSE QIRNLCALAHFNSSDPFFRTLIPSGPTCVTMITYPAGMAENAPKDSAYVGPTDPTGNPWLPPDLMVIGIPVELAHQMAVN LEESFICKRSKIAYPEKRTVIKPWV
Sequences:
>Translated_265_residues MIVINNISSKIKELGKKLTEAGRLKLRPLCVYGTDEIPNNAVPSYKIDRCIAKAVYTSALFEDTPPLYIEAAHEKCCPGG MGWIGLSEPHPMLKYFVTVGTPDFHGGAAEHLKASPELFEESKKRAGRITPPGKYIVIGPCNDNISPDTIRSIILFAGSE QIRNLCALAHFNSSDPFFRTLIPSGPTCVTMITYPAGMAENAPKDSAYVGPTDPTGNPWLPPDLMVIGIPVELAHQMAVN LEESFICKRSKIAYPEKRTVIKPWV >Mature_265_residues MIVINNISSKIKELGKKLTEAGRLKLRPLCVYGTDEIPNNAVPSYKIDRCIAKAVYTSALFEDTPPLYIEAAHEKCCPGG MGWIGLSEPHPMLKYFVTVGTPDFHGGAAEHLKASPELFEESKKRAGRITPPGKYIVIGPCNDNISPDTIRSIILFAGSE QIRNLCALAHFNSSDPFFRTLIPSGPTCVTMITYPAGMAENAPKDSAYVGPTDPTGNPWLPPDLMVIGIPVELAHQMAVN LEESFICKRSKIAYPEKRTVIKPWV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29025; Mature: 29025
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVINNISSKIKELGKKLTEAGRLKLRPLCVYGTDEIPNNAVPSYKIDRCIAKAVYTSAL CEEECCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH FEDTPPLYIEAAHEKCCPGGMGWIGLSEPHPMLKYFVTVGTPDFHGGAAEHLKASPELFE HCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCHHHHH ESKKRAGRITPPGKYIVIGPCNDNISPDTIRSIILFAGSEQIRNLCALAHFNSSDPFFRT HHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEE LIPSGPTCVTMITYPAGMAENAPKDSAYVGPTDPTGNPWLPPDLMVIGIPVELAHQMAVN ECCCCCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHC LEESFICKRSKIAYPEKRTVIKPWV CHHHHHHHHCCCCCCCCCCEECCCC >Mature Secondary Structure MIVINNISSKIKELGKKLTEAGRLKLRPLCVYGTDEIPNNAVPSYKIDRCIAKAVYTSAL CEEECCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH FEDTPPLYIEAAHEKCCPGGMGWIGLSEPHPMLKYFVTVGTPDFHGGAAEHLKASPELFE HCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCHHHHH ESKKRAGRITPPGKYIVIGPCNDNISPDTIRSIILFAGSEQIRNLCALAHFNSSDPFFRT HHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEE LIPSGPTCVTMITYPAGMAENAPKDSAYVGPTDPTGNPWLPPDLMVIGIPVELAHQMAVN ECCCCCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHC LEESFICKRSKIAYPEKRTVIKPWV CHHHHHHHHCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA