Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226249

Identifier: 21226249

GI number: 21226249

Start: 183717

End: 184427

Strand: Direct

Name: 21226249

Synonym: MM_0147

Alternate gene names: NA

Gene position: 183717-184427 (Clockwise)

Preceding gene: 21226248

Following gene: 21226250

Centisome position: 4.48

GC content: 38.96

Gene sequence:

>711_bases
TTGAAATTTATTGATAACTTTTTTAAAAATAAAGAGAGGAATAATATGAAAATAGTAGGTATACTGTCAAGCCCAAGAGG
CAAAAAAAGTAATACTTTAAAATTGATGGATGCAGCCTTGGACGGAGCCGTAGAAACAGGAGCCGAAGTCGAAGTTATCG
ATGTTGCAAAATTAAATATCAAATTTTGCATTGCATGCGATGCCTGCCATAAGAAAGGCGAATGCACAATAAAAGACGAT
TTCAATTCCGTAATGGGGAAAATACTAGCTGCGGATGGAATCATCTTGAGCAGCCCTAATTATATAACAAATGTTACAGC
CCAGCTCAAGGTATTGTTCGATAGAAGTCCACTTATGGTTCATGAACAGCTCTTTGAAGGAAAATACGGTTTTTCCTTGA
CAACTGCAGGTAGTGGCGAAGCGGATTTTGTACTTGACCTTATGAACAACTATACGAAAGCCTGCGGAGGCAACACTATT
GGAGGAGTGGGCTGTGTAATGTCACAGGGCCCTTCAGCTCTAGAAGCAGCTATTGAAAAATCGCGTGAAATGGGAAAAGA
TCTTGTAAAAGCGATAAAAGAGAAGAGGCAATATCCTGAACAAGAAGCTGCAAATAAAGCCTGGAGAGAACGATTCAAAT
ATAATCTTCTTGCCAATAAAGACCACTGGACTCATAACTGTGATTACTGGATTGAAAAAGGTTGGATGTAA

Upstream 100 bases:

>100_bases
TTCTATTCCTGAAGCCTCGATAGAAATTAGTATCGTATGGCGATTTAATCTACGTCACTAATAACCCTATAGAAGTTACA
AAAATTATAAAAAGATTTAA

Downstream 100 bases:

>100_bases
AATTGATTTTTTAGGAAGGTGATTGTTATCAACAACATCTCTAGTAAAATTAAGGAACTTGGAAAAAAGCTAACCGAAGC
TGGTAGATTGAAGCTGCGTC

Product: iron-sulfur flavoprotein

Products: NA

Alternate protein names: AF-1; Af1; Isf-1 [H]

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MKFIDNFFKNKERNNMKIVGILSSPRGKKSNTLKLMDAALDGAVETGAEVEVIDVAKLNIKFCIACDACHKKGECTIKDD
FNSVMGKILAADGIILSSPNYITNVTAQLKVLFDRSPLMVHEQLFEGKYGFSLTTAGSGEADFVLDLMNNYTKACGGNTI
GGVGCVMSQGPSALEAAIEKSREMGKDLVKAIKEKRQYPEQEAANKAWRERFKYNLLANKDHWTHNCDYWIEKGWM

Sequences:

>Translated_236_residues
MKFIDNFFKNKERNNMKIVGILSSPRGKKSNTLKLMDAALDGAVETGAEVEVIDVAKLNIKFCIACDACHKKGECTIKDD
FNSVMGKILAADGIILSSPNYITNVTAQLKVLFDRSPLMVHEQLFEGKYGFSLTTAGSGEADFVLDLMNNYTKACGGNTI
GGVGCVMSQGPSALEAAIEKSREMGKDLVKAIKEKRQYPEQEAANKAWRERFKYNLLANKDHWTHNCDYWIEKGWM
>Mature_236_residues
MKFIDNFFKNKERNNMKIVGILSSPRGKKSNTLKLMDAALDGAVETGAEVEVIDVAKLNIKFCIACDACHKKGECTIKDD
FNSVMGKILAADGIILSSPNYITNVTAQLKVLFDRSPLMVHEQLFEGKYGFSLTTAGSGEADFVLDLMNNYTKACGGNTI
GGVGCVMSQGPSALEAAIEKSREMGKDLVKAIKEKRQYPEQEAANKAWRERFKYNLLANKDHWTHNCDYWIEKGWM

Specific function: Redox-active protein probably involved in electron transport [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ssuE family. Isf subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 26247; Mature: 26247

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIDNFFKNKERNNMKIVGILSSPRGKKSNTLKLMDAALDGAVETGAEVEVIDVAKLNI
CCHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECE
KFCIACDACHKKGECTIKDDFNSVMGKILAADGIILSSPNYITNVTAQLKVLFDRSPLMV
EEEEEECCCCCCCCEEEHHHHHHHHHHHHHHCCEEEECCCHHHHHHEEEEEEECCCCHHH
HEQLFEGKYGFSLTTAGSGEADFVLDLMNNYTKACGGNTIGGVGCVMSQGPSALEAAIEK
HHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHH
SREMGKDLVKAIKEKRQYPEQEAANKAWRERFKYNLLANKDHWTHNCDYWIEKGWM
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHEECCCC
>Mature Secondary Structure
MKFIDNFFKNKERNNMKIVGILSSPRGKKSNTLKLMDAALDGAVETGAEVEVIDVAKLNI
CCHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECE
KFCIACDACHKKGECTIKDDFNSVMGKILAADGIILSSPNYITNVTAQLKVLFDRSPLMV
EEEEEECCCCCCCCEEEHHHHHHHHHHHHHHCCEEEECCCHHHHHHEEEEEEECCCCHHH
HEQLFEGKYGFSLTTAGSGEADFVLDLMNNYTKACGGNTIGGVGCVMSQGPSALEAAIEK
HHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHH
SREMGKDLVKAIKEKRQYPEQEAANKAWRERFKYNLLANKDHWTHNCDYWIEKGWM
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]