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The map label for this gene is 21226248

Identifier: 21226248

GI number: 21226248

Start: 182613

End: 183398

Strand: Direct

Name: 21226248

Synonym: MM_0146

Alternate gene names: NA

Gene position: 182613-183398 (Clockwise)

Preceding gene: 161485684

Following gene: 21226249

Centisome position: 4.46

GC content: 33.84

Gene sequence:

>786_bases
ATGTTGCTCGATGAAAAAGCGTTAGTGACATTACAAAAATTAGGATTAACATATTATGGAGCAAGGGTTTATATAACGCT
TGTTTCTCTAGGCTCGAGCGATGCAACTGAGCTTTCTATTGAATCAGAAGTTCCACGGACAAAGATATATAACGTACTGA
AAAGGCTCGAAGCTGAGAAATGGATAGCTGTAGAACACACGAGACCTATTATTTATACTGCTAAATACCCTAAAGATATA
CTCAAAGAGAAAAGAGTAGCTTTCAATTCTGAGATTAATGAAGTATCAAATCAATTGTCTGAGGTGTATGATAAAGTAAT
TGATAATGAAGTTCCGAAAGTATGGCTTTTAAGAGGAATGAACAATATAACAGCAAAAACAATCAATATGATAAAAAGAG
CTAAAAGAGACATTACGCTATTAGGAGCCCTTTACTCTGAAAATGAAATTGAGCAGCTCAAAGAAGAATTATCATATGCT
ACGAAAAAAGGGCTACATGTACGTGTTATATCTAGACAGAGTATAAAACTGAATAATGGTGAATTGGACATAATTAAAAA
CTTATCTTCGGTTATACCTCAAATAAAAATAGGTGGGCCTGAATTTTCAAAATTTGTAATAATAGATGACAAAGAACTAC
TAATTTTGTTCTCAAAGGTAGAAGACAATATTCTGGATATCGACTCTACGATAGCTATATGGATTCCAAACGTGTCGATT
GCATCTTACCAAGCAAGCATATTTAATGGTATATGGAACGGGTACTGTCAAGTTGACAGGTGCTAA

Upstream 100 bases:

>100_bases
ATTTTAAAGAACTTTTGGCACCCTGCCATAATATTGCTATTGTATGGGATATTGGAGTAACCAAAATAGTATAATGTCTC
AAAGATGGTGATCATAGAAT

Downstream 100 bases:

>100_bases
GGAATATTACCAGCTACAGTTGAGACTATTAAGTGTCCAACACCCGTCAACTTGACAGAACTGTGGAACGAATAAATCAA
CTTTGTCGGCATGAAACTCT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; TrmB Family Transcriptional Regulator; Sugar-Specific Transcriptional Regulator; Transcription Regulator Helix-Turn-Helix Family; Sugar-Specific Transcriptional Regulator TrmB Family

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MLLDEKALVTLQKLGLTYYGARVYITLVSLGSSDATELSIESEVPRTKIYNVLKRLEAEKWIAVEHTRPIIYTAKYPKDI
LKEKRVAFNSEINEVSNQLSEVYDKVIDNEVPKVWLLRGMNNITAKTINMIKRAKRDITLLGALYSENEIEQLKEELSYA
TKKGLHVRVISRQSIKLNNGELDIIKNLSSVIPQIKIGGPEFSKFVIIDDKELLILFSKVEDNILDIDSTIAIWIPNVSI
ASYQASIFNGIWNGYCQVDRC

Sequences:

>Translated_261_residues
MLLDEKALVTLQKLGLTYYGARVYITLVSLGSSDATELSIESEVPRTKIYNVLKRLEAEKWIAVEHTRPIIYTAKYPKDI
LKEKRVAFNSEINEVSNQLSEVYDKVIDNEVPKVWLLRGMNNITAKTINMIKRAKRDITLLGALYSENEIEQLKEELSYA
TKKGLHVRVISRQSIKLNNGELDIIKNLSSVIPQIKIGGPEFSKFVIIDDKELLILFSKVEDNILDIDSTIAIWIPNVSI
ASYQASIFNGIWNGYCQVDRC
>Mature_261_residues
MLLDEKALVTLQKLGLTYYGARVYITLVSLGSSDATELSIESEVPRTKIYNVLKRLEAEKWIAVEHTRPIIYTAKYPKDI
LKEKRVAFNSEINEVSNQLSEVYDKVIDNEVPKVWLLRGMNNITAKTINMIKRAKRDITLLGALYSENEIEQLKEELSYA
TKKGLHVRVISRQSIKLNNGELDIIKNLSSVIPQIKIGGPEFSKFVIIDDKELLILFSKVEDNILDIDSTIAIWIPNVSI
ASYQASIFNGIWNGYCQVDRC

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29695; Mature: 29695

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLDEKALVTLQKLGLTYYGARVYITLVSLGSSDATELSIESEVPRTKIYNVLKRLEAEK
CCCCHHHHHHHHHHCCCEECCEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHCCCC
WIAVEHTRPIIYTAKYPKDILKEKRVAFNSEINEVSNQLSEVYDKVIDNEVPKVWLLRGM
EEEEECCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
NNITAKTINMIKRAKRDITLLGALYSENEIEQLKEELSYATKKGLHVRVISRQSIKLNNG
CCHHHHHHHHHHHHHCCEEEEEHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCC
ELDIIKNLSSVIPQIKIGGPEFSKFVIIDDKELLILFSKVEDNILDIDSTIAIWIPNVSI
CHHHHHHHHHHCCEEEECCCCCEEEEEECCCCEEEEEEHHCCCEEECCCEEEEEECCCCH
ASYQASIFNGIWNGYCQVDRC
HHHHHHHHHHHCCCEEEEECC
>Mature Secondary Structure
MLLDEKALVTLQKLGLTYYGARVYITLVSLGSSDATELSIESEVPRTKIYNVLKRLEAEK
CCCCHHHHHHHHHHCCCEECCEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHCCCC
WIAVEHTRPIIYTAKYPKDILKEKRVAFNSEINEVSNQLSEVYDKVIDNEVPKVWLLRGM
EEEEECCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
NNITAKTINMIKRAKRDITLLGALYSENEIEQLKEELSYATKKGLHVRVISRQSIKLNNG
CCHHHHHHHHHHHHHCCEEEEEHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCC
ELDIIKNLSSVIPQIKIGGPEFSKFVIIDDKELLILFSKVEDNILDIDSTIAIWIPNVSI
CHHHHHHHHHHCCEEEECCCCCEEEEEECCCCEEEEEEHHCCCEEECCCEEEEEECCCCH
ASYQASIFNGIWNGYCQVDRC
HHHHHHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA