Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
---|---|
Accession | NC_003901 |
Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21226235
Identifier: 21226235
GI number: 21226235
Start: 164917
End: 166167
Strand: Direct
Name: 21226235
Synonym: MM_0133
Alternate gene names: NA
Gene position: 164917-166167 (Clockwise)
Preceding gene: 21226234
Following gene: 21226236
Centisome position: 4.03
GC content: 48.68
Gene sequence:
>1251_bases ATGGGAAGATTCACATTAAAATGTCTGAAATGCGGAAGGGAATACGGACAGGAATACAGGTTAACCTGTGATAATGACGA CTCCCTTTTGAGGGCGGATTACTTTGAAAAAAAGCTGGAACTTAGAGACCAGCCCGGAATAGGGAGATTCCATTCCTGGC TCCCTGTACAGGAAGAGCTTACCACAGAAGCGGGGCCAATCACTTACAAAAGCGAAGCTCTCGCAAAGGAACTCGGGCTT TCCAACCTGTATATAGGGTTCAGCGGGTACTGGCCCGAAAGAGAAGCATTAATTAAAACCTGCAGTTTCAAAGAACTGGA AGCCCACCCTACAATGCAGCTTCTGAAAGAGTCAGGCGGAAAAGCCATAGTTCTTGCCTCTGCAGGCAACACTGGAAGAG CTTTTGCATATTCTTCGTCCCTTACAGGCACGGACGCTTATATAGTGGTCCCGGATTCAGGCGTTTCGAGCATCTGGCTT CCTGAAGAACCTGCTAATTCCATTCATCTTATCAGCATGACTCCGGGTAATGATTACACAGATGCTATCAACCTTGCAGG CAGGCTTGCAAAACTCCCGGGAATGGTTCCTGAAGGAGGGGCAAGAAACGTTGCCAGAAGGGAAGGGATGGGAACTGTAA TGCTTGATGCAGCCGTGACCATAGGAAAAATGCCTGACCACTATTTCCAGGCTGTAGGGAGCGGTACGGGAGGAATGTCA GCATGGGAAGCTTCACTGCGGCTCAGGGACGACGGGCGTTTCGGCTCAAAGCTTCCAAAACTCCAGCTTGCCCAGAACCT CCCATTTGTTCCCATGTACAATGCCTGGAAGGCAGGAAGAAGGGAAATCATCCCTGACATTGACATGAAGGATGCAAAAA AGCAGATAGAAGAGACATATGCTACAGTTCTCACCAACAGGGCTCCTCCCTATTCCATAACTGGAGGGCTATATGATGCA CTTGTCGACACGGACGGGATAATGTATGCCATCACAAGAGAAGAGGCCCTTGAAGCAAAAGCCCTTTTTGAGTCCCTCGA AGGGATAGACATCCTGGAACCTTCCGCAGTTGCGGCTGCTTCCCTGTTAAAAGCCGTAGAAGCCGGAAACGTGGAAAAAG ACGATGTCATTCTCCTTAATATTGCAGGCGGAGGTTTTAAGCGGCTGAAAGAAGACTTTACGCTATTCCAGGTTGAACCT GAGGTTACGGTCAGCAGTTCTGAAGTCTCACTTGATGAACTGAAGATTTGA
Upstream 100 bases:
>100_bases AAATAGGAAACTAATAATAAAAAATATCACATAAAGGATATAAAGCGGATGTTTCAGGAACATATATTTAGTAAAAGAAA CCCAATTTTCTTTGATAGCA
Downstream 100 bases:
>100_bases ACTTCCATTACATCCGGAATCAAATTTCAAAAAACATAACAAAAATCTGTGTAAATCTGTTAATAGAAACCTGTAAGAAA AACAGGCTCAGAATACTCAT
Product: threonine synthase
Products: NA
Alternate protein names: CS; Cya synthase
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MGRFTLKCLKCGREYGQEYRLTCDNDDSLLRADYFEKKLELRDQPGIGRFHSWLPVQEELTTEAGPITYKSEALAKELGL SNLYIGFSGYWPEREALIKTCSFKELEAHPTMQLLKESGGKAIVLASAGNTGRAFAYSSSLTGTDAYIVVPDSGVSSIWL PEEPANSIHLISMTPGNDYTDAINLAGRLAKLPGMVPEGGARNVARREGMGTVMLDAAVTIGKMPDHYFQAVGSGTGGMS AWEASLRLRDDGRFGSKLPKLQLAQNLPFVPMYNAWKAGRREIIPDIDMKDAKKQIEETYATVLTNRAPPYSITGGLYDA LVDTDGIMYAITREEALEAKALFESLEGIDILEPSAVAAASLLKAVEAGNVEKDDVILLNIAGGGFKRLKEDFTLFQVEP EVTVSSSEVSLDELKI
Sequences:
>Translated_416_residues MGRFTLKCLKCGREYGQEYRLTCDNDDSLLRADYFEKKLELRDQPGIGRFHSWLPVQEELTTEAGPITYKSEALAKELGL SNLYIGFSGYWPEREALIKTCSFKELEAHPTMQLLKESGGKAIVLASAGNTGRAFAYSSSLTGTDAYIVVPDSGVSSIWL PEEPANSIHLISMTPGNDYTDAINLAGRLAKLPGMVPEGGARNVARREGMGTVMLDAAVTIGKMPDHYFQAVGSGTGGMS AWEASLRLRDDGRFGSKLPKLQLAQNLPFVPMYNAWKAGRREIIPDIDMKDAKKQIEETYATVLTNRAPPYSITGGLYDA LVDTDGIMYAITREEALEAKALFESLEGIDILEPSAVAAASLLKAVEAGNVEKDDVILLNIAGGGFKRLKEDFTLFQVEP EVTVSSSEVSLDELKI >Mature_415_residues GRFTLKCLKCGREYGQEYRLTCDNDDSLLRADYFEKKLELRDQPGIGRFHSWLPVQEELTTEAGPITYKSEALAKELGLS NLYIGFSGYWPEREALIKTCSFKELEAHPTMQLLKESGGKAIVLASAGNTGRAFAYSSSLTGTDAYIVVPDSGVSSIWLP EEPANSIHLISMTPGNDYTDAINLAGRLAKLPGMVPEGGARNVARREGMGTVMLDAAVTIGKMPDHYFQAVGSGTGGMSA WEASLRLRDDGRFGSKLPKLQLAQNLPFVPMYNAWKAGRREIIPDIDMKDAKKQIEETYATVLTNRAPPYSITGGLYDAL VDTDGIMYAITREEALEAKALFESLEGIDILEPSAVAAASLLKAVEAGNVEKDDVILLNIAGGGFKRLKEDFTLFQVEPE VTVSSSEVSLDELKI
Specific function: Specifically catalyzes the beta-elimination of phosphate from L-phosphoserine and the beta-addition of sulfite to the dehydroalanine intermediate to produce L-cysteate
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family. Cysteate synthase subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYAS_METMA (Q8Q0K3)
Other databases:
- EMBL: AE008384 - RefSeq: NP_632157.1 - ProteinModelPortal: Q8Q0K3 - SMR: Q8Q0K3 - GeneID: 1478475 - GenomeReviews: AE008384_GR - KEGG: mma:MM_0133 - NMPDR: fig|192952.1.peg.133 - HOGENOM: HBG538357 - OMA: CSFKELE - ProtClustDB: CLSK900494 - BioCyc: MMAZ192952:MM0133-MONOMER - HAMAP: MF_02109 - InterPro: IPR022401 - InterPro: IPR001926 - TIGRFAMs: TIGR03844
Pfam domain/function: PF00291 PALP; SSF53686 PyrdxlP-dep_enz_bsu
EC number: =2.5.1.76
Molecular weight: Translated: 45396; Mature: 45265
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: BINDING 130-130
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRFTLKCLKCGREYGQEYRLTCDNDDSLLRADYFEKKLELRDQPGIGRFHSWLPVQEEL CCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHH TTEAGPITYKSEALAKELGLSNLYIGFSGYWPEREALIKTCSFKELEAHPTMQLLKESGG CCCCCCCEECHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCHHHCCCHHHHHHHHCCC KAIVLASAGNTGRAFAYSSSLTGTDAYIVVPDSGVSSIWLPEEPANSIHLISMTPGNDYT CEEEEEECCCCCCEEEEECCCCCCCEEEEEECCCCCEEECCCCCCCCEEEEEECCCCCCH DAINLAGRLAKLPGMVPEGGARNVARREGMGTVMLDAAVTIGKMPDHYFQAVGSGTGGMS HHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEEHHHHHCCCCHHHHHHHCCCCCCCC AWEASLRLRDDGRFGSKLPKLQLAQNLPFVPMYNAWKAGRREIIPDIDMKDAKKQIEETY CCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHH ATVLTNRAPPYSITGGLYDALVDTDGIMYAITREEALEAKALFESLEGIDILEPSAVAAA HHHHHCCCCCCEECCHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHH SLLKAVEAGNVEKDDVILLNIAGGGFKRLKEDFTLFQVEPEVTVSSSEVSLDELKI HHHHHHHCCCCCCCCEEEEEECCCHHHHHHCCCEEEEECCCEEECCCCCCHHHHCC >Mature Secondary Structure GRFTLKCLKCGREYGQEYRLTCDNDDSLLRADYFEKKLELRDQPGIGRFHSWLPVQEEL CCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHH TTEAGPITYKSEALAKELGLSNLYIGFSGYWPEREALIKTCSFKELEAHPTMQLLKESGG CCCCCCCEECHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCHHHCCCHHHHHHHHCCC KAIVLASAGNTGRAFAYSSSLTGTDAYIVVPDSGVSSIWLPEEPANSIHLISMTPGNDYT CEEEEEECCCCCCEEEEECCCCCCCEEEEEECCCCCEEECCCCCCCCEEEEEECCCCCCH DAINLAGRLAKLPGMVPEGGARNVARREGMGTVMLDAAVTIGKMPDHYFQAVGSGTGGMS HHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEEHHHHHCCCCHHHHHHHCCCCCCCC AWEASLRLRDDGRFGSKLPKLQLAQNLPFVPMYNAWKAGRREIIPDIDMKDAKKQIEETY CCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHH ATVLTNRAPPYSITGGLYDALVDTDGIMYAITREEALEAKALFESLEGIDILEPSAVAAA HHHHHCCCCCCEECCHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHH SLLKAVEAGNVEKDDVILLNIAGGGFKRLKEDFTLFQVEPEVTVSSSEVSLDELKI HHHHHHHCCCCCCCCEEEEEECCCHHHHHHCCCEEEEECCCEEECCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12125824