Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226234
Identifier: 21226234
GI number: 21226234
Start: 164185
End: 164592
Strand: Direct
Name: 21226234
Synonym: MM_0132
Alternate gene names: NA
Gene position: 164185-164592 (Clockwise)
Preceding gene: 21226233
Following gene: 21226235
Centisome position: 4.01
GC content: 42.65
Gene sequence:
>408_bases ATGGCTGCAAAAATCTCACCGGGAGAAGACTCGGAGCAGTTCGGGGAAGGGAATTACATCCATATTGACACTATGGTGAT TGAATTTAACAGGACGGATGCGAATGTCCAGATAAAATACCATCTGAGCCCTTTTGCCCAGGTTTATATGTTCATGTTCG GGAGCAAGCATCTGGAGCCAAAAATAAAGGATATATTTTTTGATTTTGAAAATATAGAGGTCCGCAGGATAGGCAGATCC AGTGCATTAATCCACGTAAACGACATTTCCAGACATGACGATGAATACTACCTTCACGACTCAAGAGAACTGGGAATACA GCCGGATATACTCACCCTTGTCTATCCCGACAGGACAAGGCAAAATATAGAATATGCCAGGGCTACTCCAGACATATTCT ATGTTTGA
Upstream 100 bases:
>100_bases TTTAAGAAATAAATATATTAGAAAAGAAAACCAATACAGCGTTACACACATGAAAGTAAAAGCTATAATTACAATCGCCC TGATAATCTCGGCTGCTTTA
Downstream 100 bases:
>100_bases AATTATAGTCTGGATTTTCAGTGGCGGTCCTGCCGTCCACTAATTCAATTTCATTTATGATTCGTTTATATGATTTTTAT GATTTATTTGTATGATTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MAAKISPGEDSEQFGEGNYIHIDTMVIEFNRTDANVQIKYHLSPFAQVYMFMFGSKHLEPKIKDIFFDFENIEVRRIGRS SALIHVNDISRHDDEYYLHDSRELGIQPDILTLVYPDRTRQNIEYARATPDIFYV
Sequences:
>Translated_135_residues MAAKISPGEDSEQFGEGNYIHIDTMVIEFNRTDANVQIKYHLSPFAQVYMFMFGSKHLEPKIKDIFFDFENIEVRRIGRS SALIHVNDISRHDDEYYLHDSRELGIQPDILTLVYPDRTRQNIEYARATPDIFYV >Mature_134_residues AAKISPGEDSEQFGEGNYIHIDTMVIEFNRTDANVQIKYHLSPFAQVYMFMFGSKHLEPKIKDIFFDFENIEVRRIGRSS ALIHVNDISRHDDEYYLHDSRELGIQPDILTLVYPDRTRQNIEYARATPDIFYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15848; Mature: 15717
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKISPGEDSEQFGEGNYIHIDTMVIEFNRTDANVQIKYHLSPFAQVYMFMFGSKHLEP CCCCCCCCCCHHHCCCCCEEEEEEEEEEEECCCCEEEEEEECCHHHHHHHHHHCCCCCCC KIKDIFFDFENIEVRRIGRSSALIHVNDISRHDDEYYLHDSRELGIQPDILTLVYPDRTR CCCEEEECCCCEEEEEECCCCEEEEEECCCCCCCCEEEECCCCCCCCCCEEEEEECCCCC QNIEYARATPDIFYV CCCEEECCCCEEEEC >Mature Secondary Structure AAKISPGEDSEQFGEGNYIHIDTMVIEFNRTDANVQIKYHLSPFAQVYMFMFGSKHLEP CCCCCCCCCHHHCCCCCEEEEEEEEEEEECCCCEEEEEEECCHHHHHHHHHHCCCCCCC KIKDIFFDFENIEVRRIGRSSALIHVNDISRHDDEYYLHDSRELGIQPDILTLVYPDRTR CCCEEEECCCCEEEEEECCCCEEEEEECCCCCCCCEEEECCCCCCCCCCEEEEEECCCCC QNIEYARATPDIFYV CCCEEECCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA