Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21226231

Identifier: 21226231

GI number: 21226231

Start: 161203

End: 161967

Strand: Direct

Name: 21226231

Synonym: MM_0129

Alternate gene names: NA

Gene position: 161203-161967 (Clockwise)

Preceding gene: 21226227

Following gene: 21226233

Centisome position: 3.94

GC content: 43.14

Gene sequence:

>765_bases
ATGGCCAGAAGCAAGGTAAAAAATCTTCTCCTTCTAAAGCAGATTCACAGTGCTGTAAGCCAGATCAAGAAAGGAAAACT
GGATAAAGCTCTAGAGACTCTGGATAAAGCCGAAACATCTGCAAGGCAGTCGAAATCAACAGATGCTCTCTATTATATCC
TTTTTACCCGCGGGGGCATTCTCTATTCGGCAAAAGAATACGACCAGGCTCTTGAAGCTTATGAAAAAGCCCTTGAAGCG
GGTTCAGATCTCCTGAAAACTGACCCGGAAAATGCTGATTACCAGCATTACATGGGTACAACCCTGAGCAATACTGGAAA
TCTCCTGAAAAAGAAAAGCGAAATTGATAAAGCTGACGAATATTATTCTCAAGCCCGAAAAATTTATTTTGATCTGATCA
AAAAGGACCCTCAGAATGCTGTATACCAATCTTATGCCGGAGAAAACCTGAACAATTACGGTGAACTTCTTATGGAATCC
GGCTCCCTCGAAAAAGCCTGTGAAATCCTGAGAGAAGCTATTGAAATTTACGAAAAACTTTATAAAGAGAAGCCTGACAA
CCTCGGTTATCAGGCAGAACTTTCAGTCGCGCTCAGCCAGTTAGGAGGTTGCCTCAAACATCAGGTGCCTGAAGAATCTG
GAGCGGCAAAAGAGAAACTTGAAAAAGCTCTGGAATTGCAGGAAAGTCTGCTGGACCAGCAGCCTGAAAATGAGAAGGTT
AAAGAAGCCATCGCCCTGACAGAGGAAAGACTGAAAGGGCTTTGA

Upstream 100 bases:

>100_bases
ATAAACATCACCTGACCTGAAACTCTGTATTGAGGAGTTTATCCAGTGCCTCACAATCGATATCGACAGTTATTTAAAAA
ACAGGAAGGAATTCTCTTTC

Downstream 100 bases:

>100_bases
AAGTCCTTCAAAGGTTTTTTCCGGAAAACAGCAGCATGTGAACATAAAGGAGAACCATCAGCCCGACGACCACCCCCCAT
ATAAACTGGAGAGTAAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MARSKVKNLLLLKQIHSAVSQIKKGKLDKALETLDKAETSARQSKSTDALYYILFTRGGILYSAKEYDQALEAYEKALEA
GSDLLKTDPENADYQHYMGTTLSNTGNLLKKKSEIDKADEYYSQARKIYFDLIKKDPQNAVYQSYAGENLNNYGELLMES
GSLEKACEILREAIEIYEKLYKEKPDNLGYQAELSVALSQLGGCLKHQVPEESGAAKEKLEKALELQESLLDQQPENEKV
KEAIALTEERLKGL

Sequences:

>Translated_254_residues
MARSKVKNLLLLKQIHSAVSQIKKGKLDKALETLDKAETSARQSKSTDALYYILFTRGGILYSAKEYDQALEAYEKALEA
GSDLLKTDPENADYQHYMGTTLSNTGNLLKKKSEIDKADEYYSQARKIYFDLIKKDPQNAVYQSYAGENLNNYGELLMES
GSLEKACEILREAIEIYEKLYKEKPDNLGYQAELSVALSQLGGCLKHQVPEESGAAKEKLEKALELQESLLDQQPENEKV
KEAIALTEERLKGL
>Mature_253_residues
ARSKVKNLLLLKQIHSAVSQIKKGKLDKALETLDKAETSARQSKSTDALYYILFTRGGILYSAKEYDQALEAYEKALEAG
SDLLKTDPENADYQHYMGTTLSNTGNLLKKKSEIDKADEYYSQARKIYFDLIKKDPQNAVYQSYAGENLNNYGELLMESG
SLEKACEILREAIEIYEKLYKEKPDNLGYQAELSVALSQLGGCLKHQVPEESGAAKEKLEKALELQESLLDQQPENEKVK
EAIALTEERLKGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28587; Mature: 28455

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSKVKNLLLLKQIHSAVSQIKKGKLDKALETLDKAETSARQSKSTDALYYILFTRGGI
CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHEEHEECCCCC
LYSAKEYDQALEAYEKALEAGSDLLKTDPENADYQHYMGTTLSNTGNLLKKKSEIDKADE
EECHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH
YYSQARKIYFDLIKKDPQNAVYQSYAGENLNNYGELLMESGSLEKACEILREAIEIYEKL
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YKEKPDNLGYQAELSVALSQLGGCLKHQVPEESGAAKEKLEKALELQESLLDQQPENEKV
HHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
KEAIALTEERLKGL
HHHHHHHHHHHCCC
>Mature Secondary Structure 
ARSKVKNLLLLKQIHSAVSQIKKGKLDKALETLDKAETSARQSKSTDALYYILFTRGGI
CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHEEHEECCCCC
LYSAKEYDQALEAYEKALEAGSDLLKTDPENADYQHYMGTTLSNTGNLLKKKSEIDKADE
EECHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH
YYSQARKIYFDLIKKDPQNAVYQSYAGENLNNYGELLMESGSLEKACEILREAIEIYEKL
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YKEKPDNLGYQAELSVALSQLGGCLKHQVPEESGAAKEKLEKALELQESLLDQQPENEKV
HHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
KEAIALTEERLKGL
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA