Definition | Thermococcus onnurineus NA1, complete genome. |
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Accession | NC_011529 |
Length | 1,847,607 |
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The map label for this gene is 212224556
Identifier: 212224556
GI number: 212224556
Start: 1282133
End: 1282516
Strand: Reverse
Name: 212224556
Synonym: TON_1405
Alternate gene names: NA
Gene position: 1282516-1282133 (Counterclockwise)
Preceding gene: 212224559
Following gene: 212224555
Centisome position: 69.41
GC content: 53.65
Gene sequence:
>384_bases TTGATGGCGGTGGAAGTTGAAACCCGAAAGAAGGGTCTAATAGTGAGAGAGCCCTTCGCGACGCTCATCGTTGAGGGTAA AAAGGTCTGGGAAATAAGGAAGTCCCGCACGAGGGTGAGAGGTGAGATCCTGATTCTGAATGGAGGGAAGGCTCTGGGAA AGGCTGAACTGGTCGAGGTTCTTGGACCATTCACGCCCGAAGAGCTTGCTGAGCACAGGGACAAACACCTCGCTGATCTC GAGTTCCTCAGGGCCTATTCGAATGGAAGGCCCCTCTATGCGTGGGTTCTCCGCAACGCGGAGAAGTTCGAAAAACCTGC GAAGGTGAACATTGCCAAGGGAGTCCAGGTGTGGGCGAACGTGGTGATGAAGGATGAACAATAG
Upstream 100 bases:
>100_bases TAGGTAGTACCTCCTTTCATGGGTTCGGTGAGGTGGACTTAAAGTTTTTTGTTTGCTCCTTTCCGACGTTGGTTTTATAA GTCGGGAGTGCATTATCTCT
Downstream 100 bases:
>100_bases GCGCCTCATAATTCCGCCGGTCTCACTGCCAGTCCTTGTAGTCATCTTCATCCTCTTTCTCCTCGTTTTTCTCCTGTTCT CGAGCATAGTTATGGCGGCC
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MMAVEVETRKKGLIVREPFATLIVEGKKVWEIRKSRTRVRGEILILNGGKALGKAELVEVLGPFTPEELAEHRDKHLADL EFLRAYSNGRPLYAWVLRNAEKFEKPAKVNIAKGVQVWANVVMKDEQ
Sequences:
>Translated_127_residues MMAVEVETRKKGLIVREPFATLIVEGKKVWEIRKSRTRVRGEILILNGGKALGKAELVEVLGPFTPEELAEHRDKHLADL EFLRAYSNGRPLYAWVLRNAEKFEKPAKVNIAKGVQVWANVVMKDEQ >Mature_127_residues MMAVEVETRKKGLIVREPFATLIVEGKKVWEIRKSRTRVRGEILILNGGKALGKAELVEVLGPFTPEELAEHRDKHLADL EFLRAYSNGRPLYAWVLRNAEKFEKPAKVNIAKGVQVWANVVMKDEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14465; Mature: 14465
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAVEVETRKKGLIVREPFATLIVEGKKVWEIRKSRTRVRGEILILNGGKALGKAELVEV CEEEEECCCCCCCEEECCHHHHHCCCHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHH LGPFTPEELAEHRDKHLADLEFLRAYSNGRPLYAWVLRNAEKFEKPAKVNIAKGVQVWAN HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCHHHCCCCCCEEHHHHHHHHHH VVMKDEQ HHHCCCC >Mature Secondary Structure MMAVEVETRKKGLIVREPFATLIVEGKKVWEIRKSRTRVRGEILILNGGKALGKAELVEV CEEEEECCCCCCCEEECCHHHHHCCCHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHH LGPFTPEELAEHRDKHLADLEFLRAYSNGRPLYAWVLRNAEKFEKPAKVNIAKGVQVWAN HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCHHHCCCCCCEEHHHHHHHHHH VVMKDEQ HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA