Definition | Thermococcus onnurineus NA1, complete genome. |
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Accession | NC_011529 |
Length | 1,847,607 |
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The map label for this gene is 212224555
Identifier: 212224555
GI number: 212224555
Start: 1281439
End: 1282143
Strand: Reverse
Name: 212224555
Synonym: TON_1404
Alternate gene names: NA
Gene position: 1282143-1281439 (Counterclockwise)
Preceding gene: 212224556
Following gene: 212224554
Centisome position: 69.39
GC content: 53.19
Gene sequence:
>705_bases ATGAACAATAGGCGCCTCATAATTCCGCCGGTCTCACTGCCAGTCCTTGTAGTCATCTTCATCCTCTTTCTCCTCGTTTT TCTCCTGTTCTCGAGCATAGTTATGGCGGCCTTTGCGAAGCTTGGAATCCCTCCGCAGGTCGCCTATGCGCTTTTCCTTT TCGCATTGCTCGGCAGCTTCATCAACATCCCCATAGCTGAGGAAACCTCCTACGAGCCGGTCATACGGGTGGGGGAGGTT CGGTTCTTTGGAATCCCCTATCCAGTCCCCTATTTTGATTGGGAAGAGAGAAAGGTCATAATAGCCATAAACGTTGGCGG CGCTTTGGTTCCCCTCAGTATCGTCATCTACGAGCTTCTCAGGCTCGTCTATCTCGGGCAATTCGGGCTACTCTTCAACA CGCTCCTCGCGGTTGCGATAGCGGCCCTCTTTAGCCATGCCATAGCGAAGCCGGTTAAGGGTCTAGGAATAGCAATGCCG CTATTTTTGCCTCCTTTGATGGCTCTGATCCTAGCCCTTCTTCTTGGTGACGGAAACCCTCCGCTGGTGGCCTACGTGAG CGGAACGATGGGAGTTCTCATAGGGGCAGATTTGATGAACTGGCGCAAAATCAAGAACCTCGGCGCACCGATGGTGAGCA TAGGTGGGGCTGGAACCTTCGACGGTATCTTTCTGGCCGGTCTGATTGCCGTTCTCCTGGCATAA
Upstream 100 bases:
>100_bases CTCTATGCGTGGGTTCTCCGCAACGCGGAGAAGTTCGAAAAACCTGCGAAGGTGAACATTGCCAAGGGAGTCCAGGTGTG GGCGAACGTGGTGATGAAGG
Downstream 100 bases:
>100_bases CGGTGGGTTTATAAGGCCTGGGTTAAACATGGAAGTGGCAAGATCCGCGGTTATGGGGTGATGCTCATGATAGTGGTCGG AAGCGGTGCGAGGCACCTGG
Product: membrane protein, conserved
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MNNRRLIIPPVSLPVLVVIFILFLLVFLLFSSIVMAAFAKLGIPPQVAYALFLFALLGSFINIPIAEETSYEPVIRVGEV RFFGIPYPVPYFDWEERKVIIAINVGGALVPLSIVIYELLRLVYLGQFGLLFNTLLAVAIAALFSHAIAKPVKGLGIAMP LFLPPLMALILALLLGDGNPPLVAYVSGTMGVLIGADLMNWRKIKNLGAPMVSIGGAGTFDGIFLAGLIAVLLA
Sequences:
>Translated_234_residues MNNRRLIIPPVSLPVLVVIFILFLLVFLLFSSIVMAAFAKLGIPPQVAYALFLFALLGSFINIPIAEETSYEPVIRVGEV RFFGIPYPVPYFDWEERKVIIAINVGGALVPLSIVIYELLRLVYLGQFGLLFNTLLAVAIAALFSHAIAKPVKGLGIAMP LFLPPLMALILALLLGDGNPPLVAYVSGTMGVLIGADLMNWRKIKNLGAPMVSIGGAGTFDGIFLAGLIAVLLA >Mature_234_residues MNNRRLIIPPVSLPVLVVIFILFLLVFLLFSSIVMAAFAKLGIPPQVAYALFLFALLGSFINIPIAEETSYEPVIRVGEV RFFGIPYPVPYFDWEERKVIIAINVGGALVPLSIVIYELLRLVYLGQFGLLFNTLLAVAIAALFSHAIAKPVKGLGIAMP LFLPPLMALILALLLGDGNPPLVAYVSGTMGVLIGADLMNWRKIKNLGAPMVSIGGAGTFDGIFLAGLIAVLLA
Specific function: Unknown
COG id: COG4089
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25146; Mature: 25146
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNRRLIIPPVSLPVLVVIFILFLLVFLLFSSIVMAAFAKLGIPPQVAYALFLFALLGSF CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH INIPIAEETSYEPVIRVGEVRFFGIPYPVPYFDWEERKVIIAINVGGALVPLSIVIYELL HCCCCCCCCCCCCCEEECCEEEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH RLVYLGQFGLLFNTLLAVAIAALFSHAIAKPVKGLGIAMPLFLPPLMALILALLLGDGNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC PLVAYVSGTMGVLIGADLMNWRKIKNLGAPMVSIGGAGTFDGIFLAGLIAVLLA CEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHC >Mature Secondary Structure MNNRRLIIPPVSLPVLVVIFILFLLVFLLFSSIVMAAFAKLGIPPQVAYALFLFALLGSF CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH INIPIAEETSYEPVIRVGEVRFFGIPYPVPYFDWEERKVIIAINVGGALVPLSIVIYELL HCCCCCCCCCCCCCEEECCEEEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH RLVYLGQFGLLFNTLLAVAIAALFSHAIAKPVKGLGIAMPLFLPPLMALILALLLGDGNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC PLVAYVSGTMGVLIGADLMNWRKIKNLGAPMVSIGGAGTFDGIFLAGLIAVLLA CEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA