Definition | Thermococcus onnurineus NA1, complete genome. |
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Accession | NC_011529 |
Length | 1,847,607 |
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The map label for this gene is 212224508
Identifier: 212224508
GI number: 212224508
Start: 1229253
End: 1229924
Strand: Reverse
Name: 212224508
Synonym: TON_1357
Alternate gene names: NA
Gene position: 1229924-1229253 (Counterclockwise)
Preceding gene: 212224509
Following gene: 212224503
Centisome position: 66.57
GC content: 48.07
Gene sequence:
>672_bases ATGAAGGTTGAAGGCCTCATAGAATGCGTGAGGCAAAAGCTCGGCCGGGTTCCCGGCCTCCACTCTTTAATTCTCTTTGG CTCGCTGGTTAGGGGCGACTTCATTCCCGGAACGAGCGACGTTGACTTCTTCGCGGTTCTTGAAGATGGCGCTGATCCAG AGGGGATTCTCTCAAAGATAAGGCCCGTTCTCGAAGAGTGCTCATCCTCTCTCAGGTCAGTTGAAGTTGATATTGCATGG GAATATTATTCCAACCTCCGTGACCCGCTGAACCTTGGTTATCCCTACAAGTTCCTGACGATATATCACCGGGACTTTCG CGAGAACCATGTAGTAGTTCTAGGCGAGGATGTTGTAGAGTCTCTCCCCGAGTATAACTTCAGGGAAATACTTTCTGCCC GGTTAGATGGAATTCTGGAGAACCTTGAGCGATTTTCTGGAAACAGGAAGATGCTCCACATCCTTGCTGGAGAAACGGCT CGGCTACTGGCATTTATCCATGGCTCTGACCTGAAGAAGGATGACGTCCTTAAAACGCTGAAAGATCTCGGCGATGGTGA TGCGATTAGAATATACGAGGCATATCTTGATGGAAGAAAAACATACTTTGACGAAGAGTTTCTGAAAGAGTTCGTGAGAT TCAGGGTAGGAAAAATGAGGAAAGGCCTTTAG
Upstream 100 bases:
>100_bases AGAGCTACATGTTCAGGATTCAGACCCTGGAAGGCTCAAAGGGCTACGAGGAAAAAATAGAGAACTGGGACATCTACAAC GACGAGGAAGCCTCGACCAC
Downstream 100 bases:
>100_bases ATCACCTTTTATTTCGTTTCTTCCAGGACCTTGACACCACAACGGCAAGTGTTATTAGAACTGCTCCTGCTATTATGTAG ATGTATGCCATCCTTTTACT
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MKVEGLIECVRQKLGRVPGLHSLILFGSLVRGDFIPGTSDVDFFAVLEDGADPEGILSKIRPVLEECSSSLRSVEVDIAW EYYSNLRDPLNLGYPYKFLTIYHRDFRENHVVVLGEDVVESLPEYNFREILSARLDGILENLERFSGNRKMLHILAGETA RLLAFIHGSDLKKDDVLKTLKDLGDGDAIRIYEAYLDGRKTYFDEEFLKEFVRFRVGKMRKGL
Sequences:
>Translated_223_residues MKVEGLIECVRQKLGRVPGLHSLILFGSLVRGDFIPGTSDVDFFAVLEDGADPEGILSKIRPVLEECSSSLRSVEVDIAW EYYSNLRDPLNLGYPYKFLTIYHRDFRENHVVVLGEDVVESLPEYNFREILSARLDGILENLERFSGNRKMLHILAGETA RLLAFIHGSDLKKDDVLKTLKDLGDGDAIRIYEAYLDGRKTYFDEEFLKEFVRFRVGKMRKGL >Mature_223_residues MKVEGLIECVRQKLGRVPGLHSLILFGSLVRGDFIPGTSDVDFFAVLEDGADPEGILSKIRPVLEECSSSLRSVEVDIAW EYYSNLRDPLNLGYPYKFLTIYHRDFRENHVVVLGEDVVESLPEYNFREILSARLDGILENLERFSGNRKMLHILAGETA RLLAFIHGSDLKKDDVLKTLKDLGDGDAIRIYEAYLDGRKTYFDEEFLKEFVRFRVGKMRKGL
Specific function: Unknown
COG id: COG1708
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25522; Mature: 25522
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVEGLIECVRQKLGRVPGLHSLILFGSLVRGDFIPGTSDVDFFAVLEDGADPEGILSKI CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHH RPVLEECSSSLRSVEVDIAWEYYSNLRDPLNLGYPYKFLTIYHRDFRENHVVVLGEDVVE HHHHHHHHHHHHHHHHEEEHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECHHHHH SLPEYNFREILSARLDGILENLERFSGNRKMLHILAGETARLLAFIHGSDLKKDDVLKTL HCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHH KDLGDGDAIRIYEAYLDGRKTYFDEEFLKEFVRFRVGKMRKGL HHCCCCCEEEHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVEGLIECVRQKLGRVPGLHSLILFGSLVRGDFIPGTSDVDFFAVLEDGADPEGILSKI CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHH RPVLEECSSSLRSVEVDIAWEYYSNLRDPLNLGYPYKFLTIYHRDFRENHVVVLGEDVVE HHHHHHHHHHHHHHHHEEEHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECHHHHH SLPEYNFREILSARLDGILENLERFSGNRKMLHILAGETARLLAFIHGSDLKKDDVLKTL HCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHH KDLGDGDAIRIYEAYLDGRKTYFDEEFLKEFVRFRVGKMRKGL HHCCCCCEEEHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA