Definition | Thermococcus onnurineus NA1, complete genome. |
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Accession | NC_011529 |
Length | 1,847,607 |
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The map label for this gene is 212224509
Identifier: 212224509
GI number: 212224509
Start: 1229921
End: 1230973
Strand: Reverse
Name: 212224509
Synonym: TON_1358
Alternate gene names: NA
Gene position: 1230973-1229921 (Counterclockwise)
Preceding gene: 212224513
Following gene: 212224508
Centisome position: 66.63
GC content: 56.22
Gene sequence:
>1053_bases ATGAGGGAGATAGTTGAGAGGGTTAAGGAGAAGACGAGCATCCCCGTTTATGATAGGACCATTGAGAACGTTCTGAGCGC GGTTCTCGCGAGCAGCGATGTCTGGCGCATAGTTGACCTCAGTGAGGAGCCTCTTCCGCTGGTCGTCGCGGTGATAACGG CCCTCCACGAGCTCGGCTACATCGCTTTCGAGGAGAACGGCGTGAGGCTCACCGCCAAGGGAAAGGAGCTGGTGGAGAAG TATGGAATCGGGTCGAGAAAGGACTACACCTGCTCCCACTGCGAGGGCAAGACCGTCGAGCTCGACGCCTTCAGCGATCT GCTCGAGCAGTTCAAGGAGATCGTCAAGGACAGGCCCCAGCCGCTCCATGACTTCGATCAGGCCTACGTTACGCCAGAGA CCACCGTGGCAAGGATTGCCCTGATGCACACGAGGGGCGACCTTGAGAACAAGGAGGTCTTTGTCCTGGGTGATGACGAC CTCACCAGCGTTGCCCTGATGCTCAGCGGCCTTCCGAAAAGGATAGCCGTCCTCGACATCGACGAGAGGCTTGTTAAGTT CATCGAGAAGGTCGCGGACGAGATAGGCTTCAGCAACATCGAGATGTTCACCTTTGACCTCAGGGAGCCGCTTCCCGACT ATGCCCTCCACAAGTTCGACACCTTCATCACCGATCCTCCTGAGACTGTTGATGCCATAAGGGCCTTCGTCGGCAGGGGA ATCGCCACCCTCAAGGGCCCTGGTTGCGCTGGCTACTTCGGCATAACCAGACGCGAGAGCTCTCTCGACAAGTGGCGCGA TATACAGAGGGTTCTCCTCAACGAGTTCAACGTCGTCATAACGGACATCATCAGGAACTTCAACGAGTACGTCAACTGGG GCTACGAGGAGGAGACCAGGGCCTGGAAGCTCCTTCCGATTAAGGTCAAGCCGTCCTACAACTGGTACAAGAGCTACATG TTCAGGATTCAGACCCTGGAAGGCTCAAAGGGCTACGAGGAAAAAATAGAGAACTGGGACATCTACAACGACGAGGAAGC CTCGACCACATGA
Upstream 100 bases:
>100_bases AAAGTTGGGAGACTTATTAACTTTACCACTGTGGAAAACATTTAAAAGCGCCTCACCTTAACCCCGTTCACGAACCAAAA TCCTTCTGGAGGTGCTTGAA
Downstream 100 bases:
>100_bases AGGTTGAAGGCCTCATAGAATGCGTGAGGCAAAAGCTCGGCCGGGTTCCCGGCCTCCACTCTTTAATTCTCTTTGGCTCG CTGGTTAGGGGCGACTTCAT
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MREIVERVKEKTSIPVYDRTIENVLSAVLASSDVWRIVDLSEEPLPLVVAVITALHELGYIAFEENGVRLTAKGKELVEK YGIGSRKDYTCSHCEGKTVELDAFSDLLEQFKEIVKDRPQPLHDFDQAYVTPETTVARIALMHTRGDLENKEVFVLGDDD LTSVALMLSGLPKRIAVLDIDERLVKFIEKVADEIGFSNIEMFTFDLREPLPDYALHKFDTFITDPPETVDAIRAFVGRG IATLKGPGCAGYFGITRRESSLDKWRDIQRVLLNEFNVVITDIIRNFNEYVNWGYEEETRAWKLLPIKVKPSYNWYKSYM FRIQTLEGSKGYEEKIENWDIYNDEEASTT
Sequences:
>Translated_350_residues MREIVERVKEKTSIPVYDRTIENVLSAVLASSDVWRIVDLSEEPLPLVVAVITALHELGYIAFEENGVRLTAKGKELVEK YGIGSRKDYTCSHCEGKTVELDAFSDLLEQFKEIVKDRPQPLHDFDQAYVTPETTVARIALMHTRGDLENKEVFVLGDDD LTSVALMLSGLPKRIAVLDIDERLVKFIEKVADEIGFSNIEMFTFDLREPLPDYALHKFDTFITDPPETVDAIRAFVGRG IATLKGPGCAGYFGITRRESSLDKWRDIQRVLLNEFNVVITDIIRNFNEYVNWGYEEETRAWKLLPIKVKPSYNWYKSYM FRIQTLEGSKGYEEKIENWDIYNDEEASTT >Mature_350_residues MREIVERVKEKTSIPVYDRTIENVLSAVLASSDVWRIVDLSEEPLPLVVAVITALHELGYIAFEENGVRLTAKGKELVEK YGIGSRKDYTCSHCEGKTVELDAFSDLLEQFKEIVKDRPQPLHDFDQAYVTPETTVARIALMHTRGDLENKEVFVLGDDD LTSVALMLSGLPKRIAVLDIDERLVKFIEKVADEIGFSNIEMFTFDLREPLPDYALHKFDTFITDPPETVDAIRAFVGRG IATLKGPGCAGYFGITRRESSLDKWRDIQRVLLNEFNVVITDIIRNFNEYVNWGYEEETRAWKLLPIKVKPSYNWYKSYM FRIQTLEGSKGYEEKIENWDIYNDEEASTT
Specific function: Unknown
COG id: COG1568
COG function: function code R; Predicted methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0675 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002723 - InterPro: IPR014435 - InterPro: IPR011991 [H]
Pfam domain/function: PF01861 DUF43 [H]
EC number: NA
Molecular weight: Translated: 40184; Mature: 40184
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREIVERVKEKTSIPVYDRTIENVLSAVLASSDVWRIVDLSEEPLPLVVAVITALHELGY CHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCE IAFEENGVRLTAKGKELVEKYGIGSRKDYTCSHCEGKTVELDAFSDLLEQFKEIVKDRPQ EEEECCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCC PLHDFDQAYVTPETTVARIALMHTRGDLENKEVFVLGDDDLTSVALMLSGLPKRIAVLDI CCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCCCCCEEEEEH DERLVKFIEKVADEIGFSNIEMFTFDLREPLPDYALHKFDTFITDPPETVDAIRAFVGRG HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC IATLKGPGCAGYFGITRRESSLDKWRDIQRVLLNEFNVVITDIIRNFNEYVNWGYEEETR CEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AWKLLPIKVKPSYNWYKSYMFRIQTLEGSKGYEEKIENWDIYNDEEASTT EEEEEEEEECCCCHHHHHHHHHEEECCCCCCHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MREIVERVKEKTSIPVYDRTIENVLSAVLASSDVWRIVDLSEEPLPLVVAVITALHELGY CHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCE IAFEENGVRLTAKGKELVEKYGIGSRKDYTCSHCEGKTVELDAFSDLLEQFKEIVKDRPQ EEEECCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCC PLHDFDQAYVTPETTVARIALMHTRGDLENKEVFVLGDDDLTSVALMLSGLPKRIAVLDI CCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCCCCCEEEEEH DERLVKFIEKVADEIGFSNIEMFTFDLREPLPDYALHKFDTFITDPPETVDAIRAFVGRG HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC IATLKGPGCAGYFGITRRESSLDKWRDIQRVLLNEFNVVITDIIRNFNEYVNWGYEEETR CEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AWKLLPIKVKPSYNWYKSYMFRIQTLEGSKGYEEKIENWDIYNDEEASTT EEEEEEEEECCCCHHHHHHHHHEEECCCCCCHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]