Definition | Thermococcus onnurineus NA1, complete genome. |
---|---|
Accession | NC_011529 |
Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212224503
Identifier: 212224503
GI number: 212224503
Start: 1220752
End: 1221360
Strand: Reverse
Name: 212224503
Synonym: TON_1352
Alternate gene names: NA
Gene position: 1221360-1220752 (Counterclockwise)
Preceding gene: 212224508
Following gene: 212224502
Centisome position: 66.1
GC content: 53.04
Gene sequence:
>609_bases ATGGAGAAGTGGAAGAGGAACGTTGCCGGCCTATTCCTGATGTTTGCACTCACCTATACTCTCTACTTCGTCTGGCTTTA CGTGGAAAGTGGCGGGACGATGATGGTGAGCTACGAGCTTCCGGAGAGCTGGTTTCCGCTTTTCGTTGGAATCTTCACCT TTGGCGTGGCCTTCTTTGGAGGTTTTCTGCTAACGGCGGTAACCCGAGAGGATTTGATATTGAGGAGAGGTTTCCTGCCC CAGCTCCTAACTCTGAGTGTTCTCTTTGGCTTCCTCTCAGGAATAATGGCCACGGCGATGAAGTTAAGCACGTCCAGGCC ATTCCTTCTCGTGGTCTTCCTTCTCGGCGTGGCCCTCTGGATTACATTTGCCCGCAGGCACTCGAAGGAAATCCAGGCTG AAGAACCGATAACGGACGAGAGGGAGGAGCTGATAGAGCTGAGGAGCAAGGCCCTTGTGAGCGATGCCATGATAACGCTC CTCGCGGTAGTGCTCATCGGAGACATCTTCGGCCTTTGGGAGTTAAATGAGACGCCTCTTTACTTCCTCCTCGCGACTTG GGTATTTGCTTACCTCGCTGGCCAGCTCTACTACAGGAAGGTGATGTGA
Upstream 100 bases:
>100_bases CGCGGTTTTGAGTTGTCATGGCAGATTTAAAAACTTTGGGGCAAAGCTTATAAGGATGTAAAGGAAGCTTTACGTAAAGG AAACTTTACATGGTGGGAGC
Downstream 100 bases:
>100_bases ATGGGCTTTAGGGCCATCCACTTCGTTTTCTTATTCGTCACGATTTTCCTGATGAACTACTACTCAAGGACGAACACCTA CCTGAGCTGGTTCTTCTTCA
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MEKWKRNVAGLFLMFALTYTLYFVWLYVESGGTMMVSYELPESWFPLFVGIFTFGVAFFGGFLLTAVTREDLILRRGFLP QLLTLSVLFGFLSGIMATAMKLSTSRPFLLVVFLLGVALWITFARRHSKEIQAEEPITDEREELIELRSKALVSDAMITL LAVVLIGDIFGLWELNETPLYFLLATWVFAYLAGQLYYRKVM
Sequences:
>Translated_202_residues MEKWKRNVAGLFLMFALTYTLYFVWLYVESGGTMMVSYELPESWFPLFVGIFTFGVAFFGGFLLTAVTREDLILRRGFLP QLLTLSVLFGFLSGIMATAMKLSTSRPFLLVVFLLGVALWITFARRHSKEIQAEEPITDEREELIELRSKALVSDAMITL LAVVLIGDIFGLWELNETPLYFLLATWVFAYLAGQLYYRKVM >Mature_202_residues MEKWKRNVAGLFLMFALTYTLYFVWLYVESGGTMMVSYELPESWFPLFVGIFTFGVAFFGGFLLTAVTREDLILRRGFLP QLLTLSVLFGFLSGIMATAMKLSTSRPFLLVVFLLGVALWITFARRHSKEIQAEEPITDEREELIELRSKALVSDAMITL LAVVLIGDIFGLWELNETPLYFLLATWVFAYLAGQLYYRKVM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23161; Mature: 23161
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKWKRNVAGLFLMFALTYTLYFVWLYVESGGTMMVSYELPESWFPLFVGIFTFGVAFFG CCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHH GFLLTAVTREDLILRRGFLPQLLTLSVLFGFLSGIMATAMKLSTSRPFLLVVFLLGVALW HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH ITFARRHSKEIQAEEPITDEREELIELRSKALVSDAMITLLAVVLIGDIFGLWELNETPL HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH YFLLATWVFAYLAGQLYYRKVM HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEKWKRNVAGLFLMFALTYTLYFVWLYVESGGTMMVSYELPESWFPLFVGIFTFGVAFFG CCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHH GFLLTAVTREDLILRRGFLPQLLTLSVLFGFLSGIMATAMKLSTSRPFLLVVFLLGVALW HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH ITFARRHSKEIQAEEPITDEREELIELRSKALVSDAMITLLAVVLIGDIFGLWELNETPL HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH YFLLATWVFAYLAGQLYYRKVM HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA