Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212224503

Identifier: 212224503

GI number: 212224503

Start: 1220752

End: 1221360

Strand: Reverse

Name: 212224503

Synonym: TON_1352

Alternate gene names: NA

Gene position: 1221360-1220752 (Counterclockwise)

Preceding gene: 212224508

Following gene: 212224502

Centisome position: 66.1

GC content: 53.04

Gene sequence:

>609_bases
ATGGAGAAGTGGAAGAGGAACGTTGCCGGCCTATTCCTGATGTTTGCACTCACCTATACTCTCTACTTCGTCTGGCTTTA
CGTGGAAAGTGGCGGGACGATGATGGTGAGCTACGAGCTTCCGGAGAGCTGGTTTCCGCTTTTCGTTGGAATCTTCACCT
TTGGCGTGGCCTTCTTTGGAGGTTTTCTGCTAACGGCGGTAACCCGAGAGGATTTGATATTGAGGAGAGGTTTCCTGCCC
CAGCTCCTAACTCTGAGTGTTCTCTTTGGCTTCCTCTCAGGAATAATGGCCACGGCGATGAAGTTAAGCACGTCCAGGCC
ATTCCTTCTCGTGGTCTTCCTTCTCGGCGTGGCCCTCTGGATTACATTTGCCCGCAGGCACTCGAAGGAAATCCAGGCTG
AAGAACCGATAACGGACGAGAGGGAGGAGCTGATAGAGCTGAGGAGCAAGGCCCTTGTGAGCGATGCCATGATAACGCTC
CTCGCGGTAGTGCTCATCGGAGACATCTTCGGCCTTTGGGAGTTAAATGAGACGCCTCTTTACTTCCTCCTCGCGACTTG
GGTATTTGCTTACCTCGCTGGCCAGCTCTACTACAGGAAGGTGATGTGA

Upstream 100 bases:

>100_bases
CGCGGTTTTGAGTTGTCATGGCAGATTTAAAAACTTTGGGGCAAAGCTTATAAGGATGTAAAGGAAGCTTTACGTAAAGG
AAACTTTACATGGTGGGAGC

Downstream 100 bases:

>100_bases
ATGGGCTTTAGGGCCATCCACTTCGTTTTCTTATTCGTCACGATTTTCCTGATGAACTACTACTCAAGGACGAACACCTA
CCTGAGCTGGTTCTTCTTCA

Product: protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MEKWKRNVAGLFLMFALTYTLYFVWLYVESGGTMMVSYELPESWFPLFVGIFTFGVAFFGGFLLTAVTREDLILRRGFLP
QLLTLSVLFGFLSGIMATAMKLSTSRPFLLVVFLLGVALWITFARRHSKEIQAEEPITDEREELIELRSKALVSDAMITL
LAVVLIGDIFGLWELNETPLYFLLATWVFAYLAGQLYYRKVM

Sequences:

>Translated_202_residues
MEKWKRNVAGLFLMFALTYTLYFVWLYVESGGTMMVSYELPESWFPLFVGIFTFGVAFFGGFLLTAVTREDLILRRGFLP
QLLTLSVLFGFLSGIMATAMKLSTSRPFLLVVFLLGVALWITFARRHSKEIQAEEPITDEREELIELRSKALVSDAMITL
LAVVLIGDIFGLWELNETPLYFLLATWVFAYLAGQLYYRKVM
>Mature_202_residues
MEKWKRNVAGLFLMFALTYTLYFVWLYVESGGTMMVSYELPESWFPLFVGIFTFGVAFFGGFLLTAVTREDLILRRGFLP
QLLTLSVLFGFLSGIMATAMKLSTSRPFLLVVFLLGVALWITFARRHSKEIQAEEPITDEREELIELRSKALVSDAMITL
LAVVLIGDIFGLWELNETPLYFLLATWVFAYLAGQLYYRKVM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23161; Mature: 23161

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKWKRNVAGLFLMFALTYTLYFVWLYVESGGTMMVSYELPESWFPLFVGIFTFGVAFFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHH
GFLLTAVTREDLILRRGFLPQLLTLSVLFGFLSGIMATAMKLSTSRPFLLVVFLLGVALW
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ITFARRHSKEIQAEEPITDEREELIELRSKALVSDAMITLLAVVLIGDIFGLWELNETPL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
YFLLATWVFAYLAGQLYYRKVM
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKWKRNVAGLFLMFALTYTLYFVWLYVESGGTMMVSYELPESWFPLFVGIFTFGVAFFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHH
GFLLTAVTREDLILRRGFLPQLLTLSVLFGFLSGIMATAMKLSTSRPFLLVVFLLGVALW
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ITFARRHSKEIQAEEPITDEREELIELRSKALVSDAMITLLAVVLIGDIFGLWELNETPL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
YFLLATWVFAYLAGQLYYRKVM
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA