Definition | Thermococcus onnurineus NA1, complete genome. |
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Accession | NC_011529 |
Length | 1,847,607 |
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The map label for this gene is 212224502
Identifier: 212224502
GI number: 212224502
Start: 1220383
End: 1220751
Strand: Reverse
Name: 212224502
Synonym: TON_1351
Alternate gene names: NA
Gene position: 1220751-1220383 (Counterclockwise)
Preceding gene: 212224503
Following gene: 212224501
Centisome position: 66.07
GC content: 52.3
Gene sequence:
>369_bases ATGGGCTTTAGGGCCATCCACTTCGTTTTCTTATTCGTCACGATTTTCCTGATGAACTACTACTCAAGGACGAACACCTA CCTGAGCTGGTTCTTCTTCACGCTGACGATAGCAGGAACGTGGCTCCTGATGAAGGCCTACGAGGCAAAGGTTGGGCCGG TGGAGGATGAGAGGACGAGACTGATAACTATGAAGAGCTTCTACCACGGCCTGCTCCTCGGCCTTGTTGTTCTCGGCTAC GAGATCATCTGGCTCGCCGGGCACGATTACGAAACGGCCGCCGTGTTCGTGAAGTGGCTTATGCTTCCCCTAATGGTCGG GATCCTGACTGCAATGATTCTAAAGGTACGCTATGAGATGGTGATGTGA
Upstream 100 bases:
>100_bases CGGCCTTTGGGAGTTAAATGAGACGCCTCTTTACTTCCTCCTCGCGACTTGGGTATTTGCTTACCTCGCTGGCCAGCTCT ACTACAGGAAGGTGATGTGA
Downstream 100 bases:
>100_bases ATGAACGAGCTCGCCTTGGTATCCTTGGTGGCACTCATCGGGGGAGGATTTCTTGGATACTTCATGATGCGGACAATAGT GGAAAACACGGGCGTTCCCA
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MGFRAIHFVFLFVTIFLMNYYSRTNTYLSWFFFTLTIAGTWLLMKAYEAKVGPVEDERTRLITMKSFYHGLLLGLVVLGY EIIWLAGHDYETAAVFVKWLMLPLMVGILTAMILKVRYEMVM
Sequences:
>Translated_122_residues MGFRAIHFVFLFVTIFLMNYYSRTNTYLSWFFFTLTIAGTWLLMKAYEAKVGPVEDERTRLITMKSFYHGLLLGLVVLGY EIIWLAGHDYETAAVFVKWLMLPLMVGILTAMILKVRYEMVM >Mature_121_residues GFRAIHFVFLFVTIFLMNYYSRTNTYLSWFFFTLTIAGTWLLMKAYEAKVGPVEDERTRLITMKSFYHGLLLGLVVLGYE IIWLAGHDYETAAVFVKWLMLPLMVGILTAMILKVRYEMVM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14312; Mature: 14180
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFRAIHFVFLFVTIFLMNYYSRTNTYLSWFFFTLTIAGTWLLMKAYEAKVGPVEDERTR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH LITMKSFYHGLLLGLVVLGYEIIWLAGHDYETAAVFVKWLMLPLMVGILTAMILKVRYEM HHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VM CC >Mature Secondary Structure GFRAIHFVFLFVTIFLMNYYSRTNTYLSWFFFTLTIAGTWLLMKAYEAKVGPVEDERTR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH LITMKSFYHGLLLGLVVLGYEIIWLAGHDYETAAVFVKWLMLPLMVGILTAMILKVRYEM HHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VM CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA