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The map label for this gene is flaF [H]

Identifier: 209695935

GI number: 209695935

Start: 2696413

End: 2697570

Strand: Reverse

Name: flaF [H]

Synonym: VSAL_I2517

Alternate gene names: 209695935

Gene position: 2697570-2696413 (Counterclockwise)

Preceding gene: 209695936

Following gene: 209695934

Centisome position: 81.13

GC content: 39.64

Gene sequence:

>1158_bases
ATGAAGCGACCCGGAGCAAGAACTATGTCAATTTCAGTAAATACAAATATCTCAGCAATGACAGCACAACGTTACATGAA
TAATGCAACAGCTGCTCAAGCGGATTCAATGGAGAAATTGTCTTCAGGTTTAAAAATCAACAGCGCTGCTGATGATGCTT
CTGGTCTGCAAATTTCAAATCGTATGACAGCACAAACTCGTGGTTTGAATGTTGCTGTTCGTAATGCCAATGACGGTATG
TCGATAGCTCAAACTGCTGAAGGCGCAATGAAAGAAACAACAAATGTTCTTCAGCGTTTACGTGATTTATCACTGCAATC
TTCAAATGGTTCAAACACGGATGCTGACCGTGAAGCAATGCAAGAAGAGGCAAGCTCACTAACGGATGAGTTGAATCGTA
TCGCTGAAACAACATCGTTTGCAGGAACTCGTTTAATTAATGGTGAGTTTGGTACTAAGTCATTTCAAATTGGCGCGGAT
TCAGGCGAAGCCGTTGCGATGACATTAAATAGTATGCGAGCAGATGAAGCGACGATGGGCGGTAAATCTTATTTTGCAGA
AGAAGGTCGTGATATTAACTGGACGGTAGGCAAAGAGAATTCGCAATTTAATGTTCAATATAATGATAAAAATGGTAATG
AACAAAAAATCAATATTGCCGCAAAATCGGGTGATGATATTGAAGAGTTGGCTACTTACATTAATGGCCAGACAAATGAG
TTAAGCGCTTCTGTTACTGAAAAAGGTGTCCTACAAGTATTCATGTCTGGTGAGACTATCTCTTCTCCATTAACCTTCAG
TGGCTCTCTCGCTAATGAGTTGAAAATGGGTGGGGAATCAGACGATACCGTTGCTTCTATGAATCTGACGACCGTTGGTG
GAGCTCAGCGTTCTATTGATGTGATTGATGCAGCATTACAATATGTTGATGGTAATCGTGCATCACTCGGTGCGTTTCAA
AATCGTTTTGAAAGTGCAGTTAATAACTTAACCAACATCAATGAAAATATTTCTGACTCAAACAGTCAAATTAAAGATGT
TGATTTTGCTAAAGAAACGACAAACTTAACTAAGAATCAAATTTTAACTCAATCAAGTTCTTCGATTCTAGCCCAAGCAA
AACAAGCGCCGACAGCAGCACTGGGTTTATTAAAGTAA

Upstream 100 bases:

>100_bases
TATTCGGCTTTTTTTTATAAAAATTATTCAAGTTCTGAAACTTCGAGCCGTAAATAAATGTATCAACGATGAATTATAGG
CTTCAATCCTATAACAATAA

Downstream 100 bases:

>100_bases
GCTTTCTAAATGCCCTTTAGTTTAAGGCGAATGTATTTTTGAAAAAGCGGTGACTATAATGGTCACCGCTTTTTTGTTTT
TAATCACAGGAAAATAGGTA

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKRPGARTMSISVNTNISAMTAQRYMNNATAAQADSMEKLSSGLKINSAADDASGLQISNRMTAQTRGLNVAVRNANDGM
SIAQTAEGAMKETTNVLQRLRDLSLQSSNGSNTDADREAMQEEASSLTDELNRIAETTSFAGTRLINGEFGTKSFQIGAD
SGEAVAMTLNSMRADEATMGGKSYFAEEGRDINWTVGKENSQFNVQYNDKNGNEQKINIAAKSGDDIEELATYINGQTNE
LSASVTEKGVLQVFMSGETISSPLTFSGSLANELKMGGESDDTVASMNLTTVGGAQRSIDVIDAALQYVDGNRASLGAFQ
NRFESAVNNLTNINENISDSNSQIKDVDFAKETTNLTKNQILTQSSSSILAQAKQAPTAALGLLK

Sequences:

>Translated_385_residues
MKRPGARTMSISVNTNISAMTAQRYMNNATAAQADSMEKLSSGLKINSAADDASGLQISNRMTAQTRGLNVAVRNANDGM
SIAQTAEGAMKETTNVLQRLRDLSLQSSNGSNTDADREAMQEEASSLTDELNRIAETTSFAGTRLINGEFGTKSFQIGAD
SGEAVAMTLNSMRADEATMGGKSYFAEEGRDINWTVGKENSQFNVQYNDKNGNEQKINIAAKSGDDIEELATYINGQTNE
LSASVTEKGVLQVFMSGETISSPLTFSGSLANELKMGGESDDTVASMNLTTVGGAQRSIDVIDAALQYVDGNRASLGAFQ
NRFESAVNNLTNINENISDSNSQIKDVDFAKETTNLTKNQILTQSSSSILAQAKQAPTAALGLLK
>Mature_385_residues
MKRPGARTMSISVNTNISAMTAQRYMNNATAAQADSMEKLSSGLKINSAADDASGLQISNRMTAQTRGLNVAVRNANDGM
SIAQTAEGAMKETTNVLQRLRDLSLQSSNGSNTDADREAMQEEASSLTDELNRIAETTSFAGTRLINGEFGTKSFQIGAD
SGEAVAMTLNSMRADEATMGGKSYFAEEGRDINWTVGKENSQFNVQYNDKNGNEQKINIAAKSGDDIEELATYINGQTNE
LSASVTEKGVLQVFMSGETISSPLTFSGSLANELKMGGESDDTVASMNLTTVGGAQRSIDVIDAALQYVDGNRASLGAFQ
NRFESAVNNLTNINENISDSNSQIKDVDFAKETTNLTKNQILTQSSSSILAQAKQAPTAALGLLK

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. FlaC is not essential for flagellar synthesis and motility [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=172, Percent_Identity=40.6976744186046, Blast_Score=130, Evalue=2e-31,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029
- InterPro:   IPR010810 [H]

Pfam domain/function: PF00700 Flagellin_C; PF07196 Flagellin_IN; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 40993; Mature: 40993

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRPGARTMSISVNTNISAMTAQRYMNNATAAQADSMEKLSSGLKINSAADDASGLQISN
CCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCEECCCCCCCCCCEECC
RMTAQTRGLNVAVRNANDGMSIAQTAEGAMKETTNVLQRLRDLSLQSSNGSNTDADREAM
CHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
QEEASSLTDELNRIAETTSFAGTRLINGEFGTKSFQIGADSGEAVAMTLNSMRADEATMG
HHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCEEEEEHHHHCCCHHHCC
GKSYFAEEGRDINWTVGKENSQFNVQYNDKNGNEQKINIAAKSGDDIEELATYINGQTNE
CHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCH
LSASVTEKGVLQVFMSGETISSPLTFSGSLANELKMGGESDDTVASMNLTTVGGAQRSID
HHHHHHHCCEEEEEECCCCCCCCCEECCCHHHHHHCCCCCCCCEEEEEEEEECCCHHHHH
VIDAALQYVDGNRASLGAFQNRFESAVNNLTNINENISDSNSQIKDVDFAKETTNLTKNQ
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHH
ILTQSSSSILAQAKQAPTAALGLLK
HHHCCCHHHHHHHHCCCHHHHCCCC
>Mature Secondary Structure
MKRPGARTMSISVNTNISAMTAQRYMNNATAAQADSMEKLSSGLKINSAADDASGLQISN
CCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCEECCCCCCCCCCEECC
RMTAQTRGLNVAVRNANDGMSIAQTAEGAMKETTNVLQRLRDLSLQSSNGSNTDADREAM
CHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
QEEASSLTDELNRIAETTSFAGTRLINGEFGTKSFQIGADSGEAVAMTLNSMRADEATMG
HHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCEEEEEHHHHCCCHHHCC
GKSYFAEEGRDINWTVGKENSQFNVQYNDKNGNEQKINIAAKSGDDIEELATYINGQTNE
CHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCH
LSASVTEKGVLQVFMSGETISSPLTFSGSLANELKMGGESDDTVASMNLTTVGGAQRSID
HHHHHHHCCEEEEEECCCCCCCCCEECCCHHHHHHCCCCCCCCEEEEEEEEECCCHHHHH
VIDAALQYVDGNRASLGAFQNRFESAVNNLTNINENISDSNSQIKDVDFAKETTNLTKNQ
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHH
ILTQSSSSILAQAKQAPTAALGLLK
HHHCCCHHHHHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8752337; 8631707 [H]