Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
---|---|
Accession | NC_011312 |
Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is mazG [H]
Identifier: 209695934
GI number: 209695934
Start: 2695489
End: 2696313
Strand: Reverse
Name: mazG [H]
Synonym: VSAL_I2516
Alternate gene names: 209695934
Gene position: 2696313-2695489 (Counterclockwise)
Preceding gene: 209695935
Following gene: 209695933
Centisome position: 81.09
GC content: 36.48
Gene sequence:
>825_bases ATGACAACCCCAAATAATATGGAACAGTTACTTTCAATTATGACTCAGTTAAGGGATAAGAAATCTGGTTGTCCGTGGGA TCAAAAGCAAACCTTTGATTCTGTTATTCCTCACACCATAGAAGAGACCTATGAAGTGGTGGATGCAATTCATAAGAAAG ATTGGGTTAATTTAAAAGAAGAACTTGGGGACCTATTATTTCAAGTTATTTTCTACTCTGAAATAGCAAAAGAAGAGCAG CTGTTTGATTTTAATGATGTGGTAGATACATTAAATGAAAAATTGATCCGCCGTCATCCACACGTTTTTGGTGATGAAAT CCTTTCTACGGATGATGAGATTAGTGCTAATTGGGACAAAATAAAGCAACAAGAGCGTGCAAATAAACAGGAAAGTGACC CAAGGTCTAAGATTGGGAATGACAGTATTTTAGATTCAATTCCTACCGCCTTACCTGCATTATTAAAAGCCAATAAAATA CAAAAACAATGCTCAAAAGTAGGGTTTGACTGGAATGAACTGCAACCGGTTGCTGAAAAAGTGAATGAAGAGGTCGCAGA GGTTTTAGAAGAGGCGATAAAAAATCCACGGGATGAAAATAAAGTAGAAGAAGAATTAGGCGATTTACTTTTTGCTACAG TAAATTTAGTTCGCCATTTAGGAAAAAATCCAGAGCAAGTGTTATGCAAAGCAAATGATAAGTTTGAACGCCGTTTTCGT CAAATTGAAGCGAACATCGCTAAAAAACACAAAACTTTGCAGCAATGTGATTTAAATGAACTAGACTCTGAGTGGGAAAA TGTGAAGCGAAGTGAGCGGAATTGA
Upstream 100 bases:
>100_bases AGCTTTCTAAATGCCCTTTAGTTTAAGGCGAATGTATTTTTGAAAAAGCGGTGACTATAATGGTCACCGCTTTTTTGTTT TTAATCACAGGAAAATAGGT
Downstream 100 bases:
>100_bases TTTGGAGCAAAAAATAAATCAATTAACTGTGATACTTTTCACGTTGTGGCCATAAAGCGGTTCTGGTATATTCATTTCCC GTCCAGATAAAATCCATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NTP-PPase [H]
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTTPNNMEQLLSIMTQLRDKKSGCPWDQKQTFDSVIPHTIEETYEVVDAIHKKDWVNLKEELGDLLFQVIFYSEIAKEEQ LFDFNDVVDTLNEKLIRRHPHVFGDEILSTDDEISANWDKIKQQERANKQESDPRSKIGNDSILDSIPTALPALLKANKI QKQCSKVGFDWNELQPVAEKVNEEVAEVLEEAIKNPRDENKVEEELGDLLFATVNLVRHLGKNPEQVLCKANDKFERRFR QIEANIAKKHKTLQQCDLNELDSEWENVKRSERN
Sequences:
>Translated_274_residues MTTPNNMEQLLSIMTQLRDKKSGCPWDQKQTFDSVIPHTIEETYEVVDAIHKKDWVNLKEELGDLLFQVIFYSEIAKEEQ LFDFNDVVDTLNEKLIRRHPHVFGDEILSTDDEISANWDKIKQQERANKQESDPRSKIGNDSILDSIPTALPALLKANKI QKQCSKVGFDWNELQPVAEKVNEEVAEVLEEAIKNPRDENKVEEELGDLLFATVNLVRHLGKNPEQVLCKANDKFERRFR QIEANIAKKHKTLQQCDLNELDSEWENVKRSERN >Mature_273_residues TTPNNMEQLLSIMTQLRDKKSGCPWDQKQTFDSVIPHTIEETYEVVDAIHKKDWVNLKEELGDLLFQVIFYSEIAKEEQL FDFNDVVDTLNEKLIRRHPHVFGDEILSTDDEISANWDKIKQQERANKQESDPRSKIGNDSILDSIPTALPALLKANKIQ KQCSKVGFDWNELQPVAEKVNEEVAEVLEEAIKNPRDENKVEEELGDLLFATVNLVRHLGKNPEQVLCKANDKFERRFRQ IEANIAKKHKTLQQCDLNELDSEWENVKRSERN
Specific function: Involved in the regulation of bacterial cell survival under conditions of nutritional stress. Regulates the MazEF toxin- antitoxin (TA) module that mediates programmed cell death (PCD). This is achieved by lowering the cellular concentration of (p)ppGpp p
COG id: COG1694
COG function: function code R; Predicted pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nucleoside triphosphate pyrophosphohydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1789144, Length=268, Percent_Identity=51.4925373134328, Blast_Score=290, Evalue=5e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004518 - InterPro: IPR011551 [H]
Pfam domain/function: PF03819 MazG [H]
EC number: =3.6.1.8 [H]
Molecular weight: Translated: 31839; Mature: 31708
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPNNMEQLLSIMTQLRDKKSGCPWDQKQTFDSVIPHTIEETYEVVDAIHKKDWVNLKE CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELGDLLFQVIFYSEIAKEEQLFDFNDVVDTLNEKLIRRHPHVFGDEILSTDDEISANWDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHCCCHHH IKQQERANKQESDPRSKIGNDSILDSIPTALPALLKANKIQKQCSKVGFDWNELQPVAEK HHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VNEEVAEVLEEAIKNPRDENKVEEELGDLLFATVNLVRHLGKNPEQVLCKANDKFERRFR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHH QIEANIAKKHKTLQQCDLNELDSEWENVKRSERN HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTPNNMEQLLSIMTQLRDKKSGCPWDQKQTFDSVIPHTIEETYEVVDAIHKKDWVNLKE CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELGDLLFQVIFYSEIAKEEQLFDFNDVVDTLNEKLIRRHPHVFGDEILSTDDEISANWDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHCCCHHH IKQQERANKQESDPRSKIGNDSILDSIPTALPALLKANKIQKQCSKVGFDWNELQPVAEK HHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VNEEVAEVLEEAIKNPRDENKVEEELGDLLFATVNLVRHLGKNPEQVLCKANDKFERRFR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHH QIEANIAKKHKTLQQCDLNELDSEWENVKRSERN HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]