Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is ftsB

Identifier: 209695931

GI number: 209695931

Start: 2691877

End: 2692161

Strand: Reverse

Name: ftsB

Synonym: VSAL_I2513

Alternate gene names: 209695931

Gene position: 2692161-2691877 (Counterclockwise)

Preceding gene: 209695932

Following gene: 209695930

Centisome position: 80.96

GC content: 38.6

Gene sequence:

>285_bases
ATGCGTGCATTCGCCGTTTTACTGATTATTGCCTTAGGTTGGCTGCAATATACCTTATGGTTTGGAAAAAATGGCATGGA
GGATTACGCTCAAGTATCCAATGATGTTCAGCTTCAAGAAGAAGTAAATCAAGGGTTACGTAATCGAAATGGACAAATGT
TTGCTGAAATCGACGATTTAAGAAAAGGTTCAGCGGCAATAGAAGAGCGAGCTAGGCATGAACTCGGTATGATTAAAAAA
GGTGAGACCTTTTATCGCATTATTGATGAAAATAGTGAGGAATAA

Upstream 100 bases:

>100_bases
TTTTTTTATTTCAGCTATACAGCTAGTGAAGTTCTAATGAGGGGTTGATATAGTTAGCGCTCTTTTCATTATAACTCAAA
CATTTGTTGCCGGAGCTACT

Downstream 100 bases:

>100_bases
AAAATGTCTTCATTGTCTCCTTTATTTATTACCGTAATCGTGCCTGCTGCAGGTGTTGGCAGCCGAATGAAAGCCGATCG
CCCAAAACAATATTTAGTAC

Product: cell division protein FtsB homolog

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MRAFAVLLIIALGWLQYTLWFGKNGMEDYAQVSNDVQLQEEVNQGLRNRNGQMFAEIDDLRKGSAAIEERARHELGMIKK
GETFYRIIDENSEE

Sequences:

>Translated_94_residues
MRAFAVLLIIALGWLQYTLWFGKNGMEDYAQVSNDVQLQEEVNQGLRNRNGQMFAEIDDLRKGSAAIEERARHELGMIKK
GETFYRIIDENSEE
>Mature_94_residues
MRAFAVLLIIALGWLQYTLWFGKNGMEDYAQVSNDVQLQEEVNQGLRNRNGQMFAEIDDLRKGSAAIEERARHELGMIKK
GETFYRIIDENSEE

Specific function: Required for the cell division process

COG id: COG2919

COG function: function code D; Septum formation initiator

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein (Potential). Note=Colocalizes with ftsL to the division site

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ftsB family

Homologues:

Organism=Escherichia coli, GI1789105, Length=78, Percent_Identity=56.4102564102564, Blast_Score=99, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FTSB_ALISL (B6EKL7)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002263861.1
- GeneID:   6988725
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I2513
- HOGENOM:   HBG538814
- OMA:   ETFFRVV
- ProtClustDB:   CLSK2516796
- HAMAP:   MF_00599
- InterPro:   IPR023081
- InterPro:   IPR007060

Pfam domain/function: PF04977 DivIC

EC number: NA

Molecular weight: Translated: 10881; Mature: 10881

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x21e954b8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAFAVLLIIALGWLQYTLWFGKNGMEDYAQVSNDVQLQEEVNQGLRNRNGQMFAEIDDL
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCEEHHHHHH
RKGSAAIEERARHELGMIKKGETFYRIIDENSEE
CCCHHHHHHHHHHHHCCCCCCCHHEEEECCCCCH
>Mature Secondary Structure
MRAFAVLLIIALGWLQYTLWFGKNGMEDYAQVSNDVQLQEEVNQGLRNRNGQMFAEIDDL
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCEEHHHHHH
RKGSAAIEERARHELGMIKKGETFYRIIDENSEE
CCCHHHHHHHHHHHHCCCCCCCHHEEEECCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA