| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is ackA [H]
Identifier: 209695556
GI number: 209695556
Start: 2261339
End: 2262535
Strand: Direct
Name: ackA [H]
Synonym: VSAL_I2112
Alternate gene names: 209695556
Gene position: 2261339-2262535 (Clockwise)
Preceding gene: 209695554
Following gene: 209695557
Centisome position: 68.01
GC content: 44.19
Gene sequence:
>1197_bases ATGTCTAAGCTGGTTTTAGTTTTAAACTGCGGTAGTTCTTCTCTTAAATTTGCGGTTATTGACGCAGAATCTGGTGCAGA GCACTTAACTGGTCTTGCTGAGTGTCTTGGTCTTCCTGAAGCGCGTATTAAGTGGAAACTTGATGGCAAGCACGAAGCTC AACTAGGTGAAGGTGCTGCTCACGAAGAAGCTCTATCGTTTATGGTTGAATCTATTCTTGCTTCTAAGCCAGAGCTTAAA GCTAACCTAGGCGCAATCGGTCACCGTATCGTACACGGTGGTGAGCAATTCACTTCATCTGCTCTTATCACTGACGAAGT GCTTAAAGGTATTCAAGACGCTGCAACTTTTGCACCTCTTCATAACCCTGCTCACATCATTGGTATCGAAGCGGCTAAAC ACAACTTCCCTGAACTTCAAAACGTTGCTGTGTTTGATACTGCATTCCACCAAACAATGCCTGAAGAGTCTTACCTATAC GCTCTACCATACAACCTATACACAGATCACGGTATTCGTCGTTACGGTATGCACGGTACTTCTCACCTGTTCATCACTCG TGAAGTTGCTGGCCTATTAAACAAACCAGTTGAAGAAGTAAACATCATCAACTGTCACCTAGGTAACGGCGCATCTGTAT GTGCAATCAAGAACGGTCAATCTGTAGATACTTCTATGGGTCTTACTCCTCTTGAAGGTCTAGTAATGGGTACTCGTTGT GGTGATATCGATCCTGCGATCATTTTCCACCTACATGACGCACTAGGTTACTCTGTTGAACAAATCAACACGATGCTAAC TAAAGAGTCTGGCCTACAAGGTCTAACTCAAGTGACTTCTGACTGTCGTTTCGTTGAAGACAACTACGGTGAGAAAGAAG AAGCAACTCGTGCGATGGATGTATTCTGTCACCGTCTAGCTAAATACGTTGCAGGCTACACAGCAACACTAGAAGGTCGT CTAGACGCAATCACTTTCACTGGCGGCATCGGTGAAAACTCTGCTCCAATCCGTGAAATGGTTCTTAACCGTTTAGGTAT TTTCGGTATCGAAGTTGATAACGAAGCAAACCTTAAAGCACGTTTTGGTGGTGAAGGTACTATCACTACAGCAAACAGCC GCGTTCCTGCTATGGTTATCTCGACTAACGAAGAGCTAGTAATCGCAGAAGACACAGCTAAACTAACTGGTCTATAA
Upstream 100 bases:
>100_bases TTTTTGTACAAATGTGGGATTTTTCGTTAACTCACTACATTTGTCATGCTATATCGTTGCGATATAGCTTAATTACTGAT GAATAAATAGGTATTTATAC
Downstream 100 bases:
>100_bases TCTCTCCTAAAAGGCTAGCCACTAGGTTAGCCTTTTTTCTTTCTATGGCTTTATTCTTTAAATAAAGTCTCTTGCCCCAA TAGTTTAGAGGAATTTTCCA
Product: acetate kinase
Products: NA
Alternate protein names: Acetokinase 1 [H]
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MSKLVLVLNCGSSSLKFAVIDAESGAEHLTGLAECLGLPEARIKWKLDGKHEAQLGEGAAHEEALSFMVESILASKPELK ANLGAIGHRIVHGGEQFTSSALITDEVLKGIQDAATFAPLHNPAHIIGIEAAKHNFPELQNVAVFDTAFHQTMPEESYLY ALPYNLYTDHGIRRYGMHGTSHLFITREVAGLLNKPVEEVNIINCHLGNGASVCAIKNGQSVDTSMGLTPLEGLVMGTRC GDIDPAIIFHLHDALGYSVEQINTMLTKESGLQGLTQVTSDCRFVEDNYGEKEEATRAMDVFCHRLAKYVAGYTATLEGR LDAITFTGGIGENSAPIREMVLNRLGIFGIEVDNEANLKARFGGEGTITTANSRVPAMVISTNEELVIAEDTAKLTGL
Sequences:
>Translated_398_residues MSKLVLVLNCGSSSLKFAVIDAESGAEHLTGLAECLGLPEARIKWKLDGKHEAQLGEGAAHEEALSFMVESILASKPELK ANLGAIGHRIVHGGEQFTSSALITDEVLKGIQDAATFAPLHNPAHIIGIEAAKHNFPELQNVAVFDTAFHQTMPEESYLY ALPYNLYTDHGIRRYGMHGTSHLFITREVAGLLNKPVEEVNIINCHLGNGASVCAIKNGQSVDTSMGLTPLEGLVMGTRC GDIDPAIIFHLHDALGYSVEQINTMLTKESGLQGLTQVTSDCRFVEDNYGEKEEATRAMDVFCHRLAKYVAGYTATLEGR LDAITFTGGIGENSAPIREMVLNRLGIFGIEVDNEANLKARFGGEGTITTANSRVPAMVISTNEELVIAEDTAKLTGL >Mature_397_residues SKLVLVLNCGSSSLKFAVIDAESGAEHLTGLAECLGLPEARIKWKLDGKHEAQLGEGAAHEEALSFMVESILASKPELKA NLGAIGHRIVHGGEQFTSSALITDEVLKGIQDAATFAPLHNPAHIIGIEAAKHNFPELQNVAVFDTAFHQTMPEESYLYA LPYNLYTDHGIRRYGMHGTSHLFITREVAGLLNKPVEEVNIINCHLGNGASVCAIKNGQSVDTSMGLTPLEGLVMGTRCG DIDPAIIFHLHDALGYSVEQINTMLTKESGLQGLTQVTSDCRFVEDNYGEKEEATRAMDVFCHRLAKYVAGYTATLEGRL DAITFTGGIGENSAPIREMVLNRLGIFGIEVDNEANLKARFGGEGTITTANSRVPAMVISTNEELVIAEDTAKLTGL
Specific function: Involved In The Activation Of Acetate To Acetyl CoA And The Secretion Of Acetate. During Anaerobic Growth Of The Organism, This Enzyme Is Also Involved In The Synthesis Of Most Of The ATP Formed Catabolically. [C]
COG id: COG0282
COG function: function code C; Acetate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetokinase family [H]
Homologues:
Organism=Escherichia coli, GI1788633, Length=398, Percent_Identity=72.3618090452261, Blast_Score=603, Evalue=1e-174, Organism=Escherichia coli, GI145693184, Length=397, Percent_Identity=45.5919395465995, Blast_Score=339, Evalue=2e-94,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000890 - InterPro: IPR004372 [H]
Pfam domain/function: PF00871 Acetate_kinase [H]
EC number: =2.7.2.1 [H]
Molecular weight: Translated: 42860; Mature: 42729
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS01075 ACETATE_KINASE_1 ; PS01076 ACETATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLVLVLNCGSSSLKFAVIDAESGAEHLTGLAECLGLPEARIKWKLDGKHEAQLGEGAA CCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCH HEEALSFMVESILASKPELKANLGAIGHRIVHGGEQFTSSALITDEVLKGIQDAATFAPL HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC HNPAHIIGIEAAKHNFPELQNVAVFDTAFHQTMPEESYLYALPYNLYTDHGIRRYGMHGT CCCCEEEEEEHHCCCCCCCCCEEEEEHHHHHCCCCCCEEEEECCCHHCCCCCHHHCCCCC SHLFITREVAGLLNKPVEEVNIINCHLGNGASVCAIKNGQSVDTSMGLTPLEGLVMGTRC CEEEEHHHHHHHHHCCHHHEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHEEEECCC GDIDPAIIFHLHDALGYSVEQINTMLTKESGLQGLTQVTSDCRFVEDNYGEKEEATRAMD CCCCCCCEEEEHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCEEECCCCCCHHHHHHHHH VFCHRLAKYVAGYTATLEGRLDAITFTGGIGENSAPIREMVLNRLGIFGIEVDNEANLKA HHHHHHHHHHCCCEEEECCCEEEEEEECCCCCCCCHHHHHHHHHCCEEEEEECCCCCEEE RFGGEGTITTANSRVPAMVISTNEELVIAEDTAKLTGL EECCCEEEEECCCCCCEEEEECCCCEEEEECCHHHCCC >Mature Secondary Structure SKLVLVLNCGSSSLKFAVIDAESGAEHLTGLAECLGLPEARIKWKLDGKHEAQLGEGAA CCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCH HEEALSFMVESILASKPELKANLGAIGHRIVHGGEQFTSSALITDEVLKGIQDAATFAPL HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC HNPAHIIGIEAAKHNFPELQNVAVFDTAFHQTMPEESYLYALPYNLYTDHGIRRYGMHGT CCCCEEEEEEHHCCCCCCCCCEEEEEHHHHHCCCCCCEEEEECCCHHCCCCCHHHCCCCC SHLFITREVAGLLNKPVEEVNIINCHLGNGASVCAIKNGQSVDTSMGLTPLEGLVMGTRC CEEEEHHHHHHHHHCCHHHEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHEEEECCC GDIDPAIIFHLHDALGYSVEQINTMLTKESGLQGLTQVTSDCRFVEDNYGEKEEATRAMD CCCCCCCEEEEHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCEEECCCCCCHHHHHHHHH VFCHRLAKYVAGYTATLEGRLDAITFTGGIGENSAPIREMVLNRLGIFGIEVDNEANLKA HHHHHHHHHHCCCEEEECCCEEEEEEECCCCCCCCHHHHHHHHHCCEEEEEECCCCCEEE RFGGEGTITTANSRVPAMVISTNEELVIAEDTAKLTGL EECCCEEEEECCCCCCEEEEECCCCEEEEECCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA